RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SCAF4O95104 1147 aaKnown RBP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 CT47B1P0C2W7 299 aaPredicted RBP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 XPAP23025 273 aaPredicted RBP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 EIF4A1P60842 406 aaKnown RBP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 PHC1P78364 1004 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 MRPL49Q13405 166 aaKnown RBP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 PLEKHG4Q58EX7 1191 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 DALRD3Q5D0E6 543 aaKnown RBP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 ZBTB41Q5SVQ8 909 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 DOK3Q7L591 496 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 TAS1R1Q7RTX1 841 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 HOMER1Q86YM7 354 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 MYH16Q9H6N6 1097 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 VIRMAQ69YN4 1812 aaKnown RBP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 SOS1Q07889 1333 aaPredicted RBP6.91□□□□□ -1.3
C9orf3-205ENST00000427193 PASKQ96RG2 1323 aa6.91□□□□□ -1.3
C9orf3-205ENST00000427193 KCNQ3O43525 872 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 HOXB7P09629 217 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 BMP5P22003 454 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 PROZP22891 400 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 ADRA1BP35368 520 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 CASRP41180 1078 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 OCRLQ01968 901 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 CCDC144BQ3MJ40 725 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 TIGD2Q4W5G0 525 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 ZNF790Q6PG37 636 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 CXorf67Q86X51 503 aaPredicted RBP6.9□□□□□ -1.3
C9orf3-205ENST00000427193 VRK3Q8IV63 474 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 C8orf58Q8NAV2 365 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 GAB3Q8WWW8 586 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 PIGBQ92521 554 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 NINJ1Q92982 152 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 TSR2Q969E8 191 aaKnown RBP6.9□□□□□ -1.3
C9orf3-205ENST00000427193 KCNH6Q9H252 994 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 EIF2B4Q9UI10 523 aaKnown RBP6.9□□□□□ -1.3
C9orf3-205ENST00000427193 PACSIN3Q9UKS6 424 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 USP18Q9UMW8 372 aa6.9□□□□□ -1.3
C9orf3-205ENST00000427193 KDM3BQ7LBC6 1761 aa6.9□□□□□ -1.31
C9orf3-205ENST00000427193 A0A0C4DFX4 3053 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 CFBP00751 764 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 LAG3P18627 525 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 TGM1P22735 817 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 LSP1P33241 339 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 GZMKP49863 264 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 NRG3P56975 720 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 MAP2K1Q02750 393 aaPredicted RBP6.89□□□□□ -1.31
C9orf3-205ENST00000427193 DUSP2Q05923 314 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 EXOSC9Q06265 439 aaKnown RBP6.89□□□□□ -1.31
C9orf3-205ENST00000427193 TSPYL6Q8N831 410 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 ZNF610Q8N9Z0 462 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
C9orf3-205ENST00000427193 FDXACB1Q9BRP7 624 aaPredicted RBP6.89□□□□□ -1.31
C9orf3-205ENST00000427193 NDC1Q9BTX1 674 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 LSM14BQ9BX40 385 aaKnown RBP6.89□□□□□ -1.31
C9orf3-205ENST00000427193 SLC46A2Q9BY10 475 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 CPEB1Q9BZB8 566 aaKnown RBP6.89□□□□□ -1.31
C9orf3-205ENST00000427193 CLCA2Q9UQC9 943 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 HDAC5Q9UQL6 1122 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 NUMBLQ9Y6R0 609 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 CUL9Q8IWT3 2517 aa6.89□□□□□ -1.31
C9orf3-205ENST00000427193 UBR2Q8IWV8 1755 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 A0A1W2PR48 441 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 RARSP54136 660 aaKnown RBP6.88□□□□□ -1.31
C9orf3-205ENST00000427193 TEFQ10587 303 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 SART3Q15020 963 aaKnown RBP6.88□□□□□ -1.31
C9orf3-205ENST00000427193 KRT24Q2M2I5 525 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 LMBR1LQ6UX01 489 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 C16orf86Q6ZW13 317 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 PPM1KQ8N3J5 372 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 RSAD2Q8WXG1 361 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 UBXN4Q92575 508 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 DCLRE1CQ96SD1 692 aaKnown RBP6.88□□□□□ -1.31
C9orf3-205ENST00000427193 WNT8AQ9H1J5 351 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 MIS18AQ9NYP9 233 aa6.88□□□□□ -1.31
C9orf3-205ENST00000427193 GRID2IPA4D2P6 1211 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 B3GALT2O43825 422 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 LMNAP02545 664 aaKnown RBP6.87□□□□□ -1.31
C9orf3-205ENST00000427193 GYS1P13807 737 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 SCNN1BP51168 640 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 ITPK1Q13572 414 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 DPY19L2P1Q6NXN4 242 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 CNNM4Q6P4Q7 775 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 GLB1L2Q8IW92 636 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 AHI1Q8N157 1196 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 APPBP2Q92624 585 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 MYEOVQ96EZ4 313 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 TSPYL4Q9UJ04 414 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 PCSK5Q92824 1860 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 C4AP0C0L4 1744 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 ZNF831Q5JPB2 1677 aa6.87□□□□□ -1.31
C9orf3-205ENST00000427193 PRSS38A1L453 326 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 AHRRA9YTQ3 701 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 ZFP36P26651 326 aaKnown RBP6.86□□□□□ -1.31
C9orf3-205ENST00000427193 CHRNA5P30532 468 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 LSSP48449 732 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 TAP1Q03518 808 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
C9orf3-205ENST00000427193 MGAT5Q09328 741 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms