RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CXorf56Q9H5V9 222 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 STX7O15400 261 aaKnown RBP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 IL18RAPO95256 599 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 PEX5P50542 639 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 TTLL9Q3SXZ7 439 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 C19orf18Q8NEA5 215 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 ARHGEF3Q9NR81 526 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 SLC38A7Q9NVC3 462 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 SLC16A2P36021 539 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 LRRC74AQ0VAA2 488 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 TAB1Q15750 504 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 AFF4Q9UHB7 1163 aaKnown RBP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 SF3B1O75533 1304 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 APRTP07741 180 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 HOXD10P28358 340 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 ARL4DP49703 201 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 DCAF4L1Q3SXM0 396 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 PID1Q7Z2X4 250 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 SEC16BQ96JE7 1060 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 ZNF341Q9BYN7 854 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 EIF2AK2P19525 551 aaKnown RBP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 ARHGEF7Q14155 803 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 PDIA5Q14554 519 aa15.09■□□□□ 0.01
PTPN13-203ENST00000427191 PRPF39Q86UA1 669 aaKnown RBP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 EXOSC4Q9NPD3 245 aaKnown RBP15.09■□□□□ 0.01
PTPN13-203ENST00000427191 CCT8L1PA6NM43 557 aa15.08■□□□□ 0.01
PTPN13-203ENST00000427191 THTPAQ9BU02 230 aa15.08■□□□□ 0.01
PTPN13-203ENST00000427191 POLR3FQ9H1D9 316 aaPredicted RBP15.08■□□□□ 0.01
PTPN13-203ENST00000427191 PSMC6P62333 389 aa15.08■□□□□ 0.01
PTPN13-203ENST00000427191 CHMP1BQ7LBR1 199 aa15.08■□□□□ 0.01
PTPN13-203ENST00000427191 THNSL1Q8IYQ7 743 aa15.08■□□□□ 0.01
PTPN13-203ENST00000427191 BARHL2Q9NY43 387 aa15.08■□□□□ 0.01
PTPN13-203ENST00000427191 FBXO2Q9UK22 296 aaPredicted RBP15.08■□□□□ 0.01
PTPN13-203ENST00000427191 NEU2Q9Y3R4 380 aa15.08■□□□□ 0.01
PTPN13-203ENST00000427191 SOAT2O75908 522 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 YAF2Q8IY57 180 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 TASP1Q9H6P5 420 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 C6orf203Q9P0P8 240 aaPredicted RBP15.08■□□□□ 0
PTPN13-203ENST00000427191 PNMA8CA0A1B0GUJ8 204 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 MYL3P08590 195 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 FGFR4P22455 802 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 PTK7Q13308 1070 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 MLXIPLQ9NP71 852 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 LATS2Q9NRM7 1088 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 ZC3H4Q9UPT8 1303 aaKnown RBP15.08■□□□□ 0
PTPN13-203ENST00000427191 SERPINB12Q96P63 405 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 MTRF1O75570 445 aaKnown RBP15.08■□□□□ 0
PTPN13-203ENST00000427191 HPS3Q969F9 1004 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 IL17RAQ96F46 866 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 ECSITQ9BQ95 431 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 FAM49AQ9H0Q0 323 aaPredicted RBP15.08■□□□□ 0
PTPN13-203ENST00000427191 PIGUQ9H490 435 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 RAD21L1Q9H4I0 556 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 PIDD1Q9HB75 910 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 AGO2Q9UKV8 859 aaKnown RBP15.08■□□□□ 0
PTPN13-203ENST00000427191 GDF11O95390 407 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 ATP5BP06576 529 aaKnown RBP15.08■□□□□ 0
PTPN13-203ENST00000427191 CNTFP26441 200 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 USP39Q53GS9 565 aaKnown RBP15.08■□□□□ 0
PTPN13-203ENST00000427191 MANSC1Q9H8J5 431 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 CD274Q9NZQ7 290 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 POLIQ9UNA4 740 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 GDAQ9Y2T3 454 aa15.08■□□□□ 0
PTPN13-203ENST00000427191 LSP1P33241 339 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 ITGA1P56199 1179 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 PLOD1Q02809 727 aaPredicted RBP15.07■□□□□ 0
PTPN13-203ENST00000427191 CARD9Q9H257 536 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 HPS5Q9UPZ3 1129 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 EIF3LQ9Y262 564 aaKnown RBP15.07■□□□□ 0
PTPN13-203ENST00000427191 SUPT3HB4E1H0 165 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 GRM4Q14833 912 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 NECTIN1Q15223 517 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 UBE2SQ16763 222 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 SNX31Q8N9S9 440 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 JADE3Q92613 823 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 CASP10Q92851 521 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 ELMO2Q96JJ3 720 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 APEX2Q9UBZ4 518 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 PTPRKQ15262 1439 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 SLCO1B7G3V0H7 640 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 SERPINH1P50454 418 aaKnown RBP15.07■□□□□ 0
PTPN13-203ENST00000427191 CLEC4GQ6UXB4 293 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 CCDC60Q8IWA6 550 aaPredicted RBP15.07■□□□□ 0
PTPN13-203ENST00000427191 CYP4Z2PQ8N1L4 340 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 SYN2Q92777 582 aaPredicted RBP15.07■□□□□ 0
PTPN13-203ENST00000427191 INPP5DQ92835 1189 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 ARHGEF40Q8TER5 1519 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 DYRK3O43781 588 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 PSMC3P17980 439 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 APOBEC3FQ8IUX4 373 aaKnown RBP15.07■□□□□ 0
PTPN13-203ENST00000427191 SUGP1Q8IWZ8 645 aaKnown RBP15.07■□□□□ 0
PTPN13-203ENST00000427191 DPP10Q8N608 796 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 GOLPH3Q9H4A6 298 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 A0A1W2PQJ5 194 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 A8MXQ7 604 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 FDFT1P37268 417 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 NLRP9Q7RTR0 991 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 PIGOQ8TEQ8 1089 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 WNK4Q96J92 1243 aa15.07■□□□□ 0
PTPN13-203ENST00000427191 ARMC7Q9H6L4 198 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms