RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SERPINB4P48594 390 aa18.81■□□□□ 0.6
ARHGEF28-203ENST00000426542 SERPINB9P50453 376 aa18.81■□□□□ 0.6
ARHGEF28-203ENST00000426542 NBPF15Q8N660 670 aa18.81■□□□□ 0.6
ARHGEF28-203ENST00000426542 UBA3Q8TBC4 463 aa18.81■□□□□ 0.6
ARHGEF28-203ENST00000426542 C9orf72Q96LT7 481 aa18.81■□□□□ 0.6
ARHGEF28-203ENST00000426542 ZNF512Q96ME7 567 aaPredicted RBP18.81■□□□□ 0.6
ARHGEF28-203ENST00000426542 ADGRA2Q96PE1 1338 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 RPS6KA5O75582 802 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 RHOBTB3O94955 611 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 SOX11P35716 441 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 PTK7Q13308 1070 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 ARHGEF7Q14155 803 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 GOLGA7BQ2TAP0 167 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 MEI1Q5TIA1 1274 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 ATF7IP2Q5U623 682 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 EPN3Q9H201 632 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 EHD2Q9NZN4 543 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 IL18RAPO95256 599 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 UGP2Q16851 508 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 C19orf81C9J6K1 198 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 SV2CQ496J9 727 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 CDC42EP5Q6NZY7 148 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 SH2D3CQ8N5H7 860 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 IGDCC4Q8TDY8 1250 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 RANBP17Q9H2T7 1088 aaKnown RBP18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 FAM32AQ9Y421 112 aaKnown RBP18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 ATMINO43313 823 aaPredicted RBP18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 SRP72O76094 671 aaKnown RBP18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 MGAT5BQ3V5L5 792 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 LRIG3Q6UXM1 1119 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 PGBD3Q8N328 593 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 PRR12Q9ULL5 1215 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 CDYLQ9Y232 598 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 ATXN3P54252 364 aaPredicted RBP18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 TMCO5AQ8N6Q1 288 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 SHCBP1Q8NEM2 672 aa18.8■□□□□ 0.6
ARHGEF28-203ENST00000426542 HLA-DRAP01903 254 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 RFC5P40937 340 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 DYNC1I2Q13409 638 aaKnown RBP18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 ZNF473Q8WTR7 871 aaKnown RBP18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 NT5C1AQ9BXI3 368 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 KCND2Q9NZV8 630 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 ZNF70Q9UC06 446 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 ITIH6Q6UXX5 1313 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 ZNF609O15014 1411 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 TBX3O15119 743 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 NR3C2P08235 984 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 LRRC36Q1X8D7 754 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 KRT35Q92764 455 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 KDM6AO15550 1401 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 hCG_2014768A0A024R1R8 64 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 ETFBP38117 255 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 ARL4DP49703 201 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 LAMB3Q13751 1172 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 NAB2Q15742 525 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 CLEC4FQ8N1N0 589 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 STKLD1Q8NE28 680 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 SRPK1Q96SB4 655 aaKnown RBP18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 UBE3AQ05086 875 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 SNAPC2Q13487 334 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 SMTNL2Q2TAL5 461 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 IPMKQ8NFU5 416 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 SMARCAL1Q9NZC9 954 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 SH3BP1Q9Y3L3 701 aa18.79■□□□□ 0.6
ARHGEF28-203ENST00000426542 ZNF263O14978 683 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 WEE2P0C1S8 567 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 TWF1Q12792 350 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 SBK1Q52WX2 424 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 LBHD1Q9BQE6 289 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 CATSPERBQ9H7T0 1116 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 ZNF229Q9UJW7 825 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 SSU72P8A0A1W2PR75 194 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 H0Y626 953 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 TRIM16O95361 564 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 EFCAB12Q6NXP0 572 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 C16orf89Q6UX73 402 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 LRRC71Q8N4P6 559 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 FAM162AQ96A26 154 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 MOV10L1Q9BXT6 1211 aaKnown RBP18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 METTL5Q9NRN9 209 aaKnown RBP18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 CRB1P82279 1406 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 MAGEB2O15479 319 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 PCYT1AP49585 367 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 KLK7P49862 253 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 PTRHD1Q6GMV3 140 aaKnown RBP18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 FAM117BQ6P1L5 589 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 ARHGAP18Q8N392 663 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 NYAP2Q9P242 653 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 PLA2R1Q13018 1463 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 GPD1P21695 349 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 DCAF6Q58WW2 860 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 RASGRP2Q7LDG7 609 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 CYGBQ8WWM9 190 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 CRAMP1Q96RY5 1269 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 SLC38A7Q9NVC3 462 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 A2ML1A8K2U0 1454 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 VCAM1P19320 739 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 PLA2G4AP47712 749 aa18.78■□□□□ 0.6
ARHGEF28-203ENST00000426542 STK4Q13043 487 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms