RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 SYN1P17600 705 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 CD58P19256 250 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 CLCNKBP51801 687 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 TNNC1P63316 161 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 TDRD12Q587J7 1177 aaKnown RBP16.92■□□□□ 0.3
SCRN1-205ENST00000425819 TMTC1Q8IUR5 882 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 CRIPAKQ8N1N5 446 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 ZNF560Q96MR9 790 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 SMYD3Q9H7B4 428 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 ALPK3Q96L96 1907 aa16.92■□□□□ 0.3
SCRN1-205ENST00000425819 PODXLO00592 558 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 SPTLC1O15269 473 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 SERPING1P05155 500 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 P4HA1P13674 534 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 FERP16591 822 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 ACO1P21399 889 aaKnown RBP16.91■□□□□ 0.3
SCRN1-205ENST00000425819 PNPLA4P41247 253 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 RAP1GAPP47736 663 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 FPGSQ05932 587 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 KLHL30Q0D2K2 578 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 PPIGQ13427 754 aaKnown RBP eCLIP16.91■□□□□ 0.34e-9■□□□□ 10.2
SCRN1-205ENST00000425819 TUSC3Q13454 348 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 MTF1Q14872 753 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 HGSNATQ68CP4 663 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 IRF2BP2Q7Z5L9 587 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 FAM71AQ8IYT1 594 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 CASD1Q96PB1 797 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 MMS19Q96T76 1030 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 SDCBP2Q9H190 292 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 TBC1D13Q9NVG8 400 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 ARHGAP20Q9P2F6 1191 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 ZMYND8Q9ULU4 1186 aaPredicted RBP16.91■□□□□ 0.3
SCRN1-205ENST00000425819 PYCARDQ9ULZ3 195 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 PCDHB4Q9Y5E5 795 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 SNX9Q9Y5X1 595 aa16.91■□□□□ 0.3
SCRN1-205ENST00000425819 PDCD11Q14690 1871 aaKnown RBP16.91■□□□□ 0.3
SCRN1-205ENST00000425819 CYP26A1O43174 497 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 HOXA2O43364 376 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 IGFBP6P24592 240 aaPredicted RBP16.9■□□□□ 0.3
SCRN1-205ENST00000425819 TAF6P49848 677 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 CDH8P55286 799 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 CDK17Q00537 523 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 RNASELQ05823 741 aaKnown RBP16.9■□□□□ 0.3
SCRN1-205ENST00000425819 RAD9BQ6WBX8 426 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 ZNF280BQ86YH2 543 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 PAAF1Q9BRP4 392 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 BCO2Q9BYV7 579 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 HAUS4Q9H6D7 363 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
SCRN1-205ENST00000425819 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
SCRN1-205ENST00000425819 KANSL3Q9P2N6 904 aa16.9■□□□□ 0.3
SCRN1-205ENST00000425819 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.9■□□□□ 0.3
SCRN1-205ENST00000425819 TBKBP1A7MCY6 615 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 KPNA7A9QM74 516 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 ARHGAP6O43182 974 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 B4GALT3O60512 393 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 DDHD2O94830 711 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 AMHP03971 560 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 RPL9P32969 192 aaKnown RBP16.89■□□□□ 0.3
SCRN1-205ENST00000425819 EIF4A3P38919 411 aaKnown RBP16.89■□□□□ 0.3
SCRN1-205ENST00000425819 LILRA4P59901 499 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 DEFB103AP81534 67 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 SV2CQ496J9 727 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 TMEM270Q6UE05 265 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 C16orf59Q7L2K0 433 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 OTOP2Q7RTS6 562 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 FMNL3Q8IVF7 1028 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 UBR7Q8N806 425 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 DPF3Q92784 378 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 JAKMIP2Q96AA8 810 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 FAM193BQ96PV7 902 aaPredicted RBP16.89■□□□□ 0.3
SCRN1-205ENST00000425819 ACP6Q9NPH0 428 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 CISHQ9NSE2 258 aa16.89■□□□□ 0.3
SCRN1-205ENST00000425819 EFCAB14O75071 495 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 CALCAP01258 141 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 CCDC172P0C7W6 258 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 CLCN1P35523 988 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 PRKCIP41743 596 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 WDR5P61964 334 aaKnown RBP16.89■□□□□ 0.29
SCRN1-205ENST00000425819 PTK2Q05397 1052 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 UPP1Q16831 310 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 FAM117BQ6P1L5 589 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 TMCO2Q7Z6W1 182 aaPredicted RBP16.89■□□□□ 0.29
SCRN1-205ENST00000425819 RBBP8NLQ8NC74 664 aaPredicted RBP16.89■□□□□ 0.29
SCRN1-205ENST00000425819 C3orf58Q8NDZ4 430 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 DDX27Q96GQ7 796 aaKnown RBP16.89■□□□□ 0.29
SCRN1-205ENST00000425819 FAXDC2Q96IV6 333 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 DEF6Q9H4E7 631 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 CYP3A43Q9HB55 503 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.89■□□□□ 0.29
SCRN1-205ENST00000425819 ZKSCAN5Q9Y2L8 839 aa16.89■□□□□ 0.29
SCRN1-205ENST00000425819 ZBBXA8MT70 800 aa16.88■□□□□ 0.29
SCRN1-205ENST00000425819 BAIAP3O94812 1187 aa16.88■□□□□ 0.29
SCRN1-205ENST00000425819 FGBP02675 491 aa16.88■□□□□ 0.29
SCRN1-205ENST00000425819 EPHB4P54760 987 aa16.88■□□□□ 0.29
SCRN1-205ENST00000425819 YWHAEP62258 255 aaKnown RBP16.88■□□□□ 0.29
SCRN1-205ENST00000425819 DSC1Q08554 894 aa16.88■□□□□ 0.29
SCRN1-205ENST00000425819 PAN2Q504Q3 1202 aaKnown RBP16.88■□□□□ 0.29
SCRN1-205ENST00000425819 ZNF394Q53GI3 561 aa16.88■□□□□ 0.29
SCRN1-205ENST00000425819 ZNF365Q70YC5 407 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms