RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LSM14BQ9BX40 385 aaKnown RBP16.82■□□□□ 0.28
SHOX2-202ENST00000425436 RBAKQ9NYW8 714 aaPredicted RBP16.82■□□□□ 0.28
SHOX2-202ENST00000425436 CNTN3Q9P232 1028 aa16.82■□□□□ 0.28
SHOX2-202ENST00000425436 ZNF233A6NK53 670 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
SHOX2-202ENST00000425436 KRT86O43790 486 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 ADRB2P07550 413 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 BCAR1P56945 870 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 SNRNP35Q16560 246 aaKnown RBP16.81■□□□□ 0.28
SHOX2-202ENST00000425436 SFMBT2Q5VUG0 894 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 BAP1Q92560 729 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 CLP1Q92989 425 aaKnown RBP16.81■□□□□ 0.28
SHOX2-202ENST00000425436 C18orf25Q96B23 403 aaPredicted RBP16.81■□□□□ 0.28
SHOX2-202ENST00000425436 KIF12Q96FN5 646 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 FBXL18Q96ME1 805 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 FAM161BQ96MY7 647 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 PPP1R10Q96QC0 940 aaKnown RBP16.81■□□□□ 0.28
SHOX2-202ENST00000425436 PLEKHA5Q9HAU0 1116 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 GOLGA2P5Q9HBQ8 144 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 LUC7LQ9NQ29 371 aaKnown RBP16.81■□□□□ 0.28
SHOX2-202ENST00000425436 LZTFL1Q9NQ48 299 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 BZW2Q9Y6E2 419 aaKnown RBP16.81■□□□□ 0.28
SHOX2-202ENST00000425436 MYO9BQ13459 2157 aa16.81■□□□□ 0.28
SHOX2-202ENST00000425436 PDCD11Q14690 1871 aaKnown RBP16.81■□□□□ 0.28
SHOX2-202ENST00000425436 CASTOR2A6NHX0 329 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 SERPING1P05155 500 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 KRT13P13646 458 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 KCNE1P15382 129 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 CTNNB1P35222 781 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 BMPR1AP36894 532 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 SOX4Q06945 474 aaPredicted RBP16.8■□□□□ 0.28
SHOX2-202ENST00000425436 CETN1Q12798 172 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 GRIK3Q13003 919 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 NAB2Q15742 525 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 EPC2Q52LR7 807 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 TCERG1LQ5VWI1 586 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 JADE1Q6IE81 842 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 INTS8Q75QN2 995 aaKnown RBP16.8■□□□□ 0.28
SHOX2-202ENST00000425436 MTERF4Q7Z6M4 381 aaKnown RBP16.8■□□□□ 0.28
SHOX2-202ENST00000425436 COLGALT2Q8IYK4 626 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 ACRBPQ8NEB7 543 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 ARNTL2Q8WYA1 636 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 SLC35C1Q96A29 364 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 FAM84AQ96KN4 292 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 TGS1Q96RS0 853 aaKnown RBP16.8■□□□□ 0.28
SHOX2-202ENST00000425436 PAAF1Q9BRP4 392 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 TTYH1Q9H313 450 aaPredicted RBP16.8■□□□□ 0.28
SHOX2-202ENST00000425436 DEF6Q9H4E7 631 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 AIPL1Q9NZN9 384 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 LRRC53A6NM62 1247 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 RFXAPO00287 272 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 N4BP1O75113 896 aaKnown RBP16.8■□□□□ 0.28
SHOX2-202ENST00000425436 LCA5LO95447 670 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 ALDH2P05091 517 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 GALTP07902 379 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 NFICP08651 508 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 ANXA13P27216 316 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 OR1G1P47890 313 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 SLC11A1P49279 550 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 GUCY2FP51841 1108 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 ERVK-21P61565 698 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 ENPEPQ07075 957 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 DSC1Q08554 894 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 DCAF17Q5H9S7 520 aaPredicted RBP16.8■□□□□ 0.28
SHOX2-202ENST00000425436 KCNT2Q6UVM3 1135 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 KIAA1328Q86T90 577 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 BRSK2Q8IWQ3 736 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 COLGALT1Q8NBJ5 622 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
SHOX2-202ENST00000425436 POP1Q99575 1024 aaKnown RBP16.8■□□□□ 0.28
SHOX2-202ENST00000425436 RALGAPA2Q2PPJ7 1873 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 EPOPA6NHQ4 379 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 F8W810 466 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 NRP1O14786 923 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 EPHB6O15197 1021 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 P4HA2O15460 535 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 URI1O94763 535 aaPredicted RBP16.79■□□□□ 0.28
SHOX2-202ENST00000425436 NOL4O94818 638 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 IL18RAPO95256 599 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 LAG3P18627 525 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 IGFBP6P24592 240 aaPredicted RBP16.79■□□□□ 0.28
SHOX2-202ENST00000425436 ALDH7A1P49419 539 aaKnown RBP16.79■□□□□ 0.28
SHOX2-202ENST00000425436 MCCD1P59942 119 aaPredicted RBP16.79■□□□□ 0.28
SHOX2-202ENST00000425436 POLR2FP61218 127 aaKnown RBP16.79■□□□□ 0.28
SHOX2-202ENST00000425436 TUBB4BP68371 445 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 KIF5AQ12840 1032 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 TUSC3Q13454 348 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 ZBTB6Q15916 424 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 KLHDC7AQ5VTJ3 777 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 LMBRD2Q68DH5 695 aaPredicted RBP16.79■□□□□ 0.28
SHOX2-202ENST00000425436 RSPH1Q8WYR4 309 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 ASB7Q9H672 318 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 AAASQ9NRG9 546 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 TUBGCP4Q9UGJ1 667 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 PRG3Q9Y2Y8 225 aaPredicted RBP16.79■□□□□ 0.28
SHOX2-202ENST00000425436 PCDHB12Q9Y5F1 795 aa16.79■□□□□ 0.28
SHOX2-202ENST00000425436 TRANK1O15050 2925 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms