RNA–Protein interactions for RNA: ENST00000425254.2

LINC01534-201, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 2 BASIC

Gene LINC01534, Length 815 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-201ENST00000425254 SPPL3Q8TCT6 385 aa16.8■□□□□ 0.28
LINC01534-201ENST00000425254 ARNTL2Q8WYA1 636 aa16.8■□□□□ 0.28
LINC01534-201ENST00000425254 TMEM169Q96HH4 297 aa16.8■□□□□ 0.28
LINC01534-201ENST00000425254 SUSD3Q96L08 255 aa16.8■□□□□ 0.28
LINC01534-201ENST00000425254 B3GALT6Q96L58 329 aa16.8■□□□□ 0.28
LINC01534-201ENST00000425254 TTYH1Q9H313 450 aaPredicted RBP16.8■□□□□ 0.28
LINC01534-201ENST00000425254 VRTNQ9H8Y1 702 aa16.8■□□□□ 0.28
LINC01534-201ENST00000425254 NUB1Q9Y5A7 615 aa16.8■□□□□ 0.28
LINC01534-201ENST00000425254 CHD9Q3L8U1 2897 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 TDRD15B5MCY1 1934 aaKnown RBP16.79■□□□□ 0.28
LINC01534-201ENST00000425254 LGALS16A8MUM7 142 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 KPNA7A9QM74 516 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 H3BNC9 293 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 RFXAPO00287 272 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 GRM6O15303 877 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 AP5Z1O43299 807 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 STAU1O95793 577 aaKnown RBP16.79■□□□□ 0.28
LINC01534-201ENST00000425254 ATICP31939 592 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 PNPLA4P41247 253 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 TPM4P67936 248 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 APBA1Q02410 837 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 KCNMA1Q12791 1236 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 CAMK1Q14012 370 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 SGSM1Q2NKQ1 1148 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 ZNF699Q32M78 642 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 DPY19L2P1Q6NXN4 242 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 DDX53Q86TM3 631 aaKnown RBP16.79■□□□□ 0.28
LINC01534-201ENST00000425254 EHBP1Q8NDI1 1231 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 FBXO22Q8NEZ5 403 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 SENP8Q96LD8 212 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 CRACR2AQ9BSW2 395 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 ZNF576Q9H609 170 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 RTN4Q9NQC3 1192 aaKnown RBP16.79■□□□□ 0.28
LINC01534-201ENST00000425254 POLIQ9UNA4 740 aa16.79■□□□□ 0.28
LINC01534-201ENST00000425254 SF3B1O75533 1304 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC01534-201ENST00000425254 KIAA1671Q9BY89 1806 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 A0A1B0GTH6 734 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 CARNS1A5YM72 827 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 M0QZQ0 153 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 PES1O00541 588 aaKnown RBP16.78■□□□□ 0.28
LINC01534-201ENST00000425254 TEX33O43247 280 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 SLC9A1P19634 815 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 TKTP29401 623 aaKnown RBP16.78■□□□□ 0.28
LINC01534-201ENST00000425254 MYO1EQ12965 1108 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 GPM6BQ13491 265 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 PTPN21Q16825 1174 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 WDR72Q3MJ13 1102 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 SV2CQ496J9 727 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 HABP4Q5JVS0 413 aaKnown RBP16.78■□□□□ 0.28
LINC01534-201ENST00000425254 FAM171A1Q5VUB5 890 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 LIMS2Q7Z4I7 341 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 ANKRD20A12PQ8NF67 263 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 TATDN2Q93075 761 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 C11orf84Q9BUA3 381 aaPredicted RBP16.78■□□□□ 0.28
LINC01534-201ENST00000425254 INTS2Q9H0H0 1204 aaKnown RBP16.78■□□□□ 0.28
LINC01534-201ENST00000425254 GDAP2Q9NXN4 497 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 TIMM13Q9Y5L4 95 aaPredicted RBP16.78■□□□□ 0.28
LINC01534-201ENST00000425254 SNX9Q9Y5X1 595 aa16.78■□□□□ 0.28
LINC01534-201ENST00000425254 GTPBP10A4D1E9 387 aaKnown RBP16.77■□□□□ 0.28
LINC01534-201ENST00000425254 CYB561D2O14569 222 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 LPXNO60711 386 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 FGFR3P22607 806 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 PON1P27169 355 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 KLK7P49862 253 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 ERVFC1P60507 584 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 NOP14P78316 857 aaKnown RBP16.77■□□□□ 0.28
LINC01534-201ENST00000425254 KRT17Q04695 432 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 LRMPQ12912 555 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 RTP2Q5QGT7 225 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 DSTYKQ6XUX3 929 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 GBP6Q6ZN66 633 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 VPS52Q8N1B4 723 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 GDPD5Q8WTR4 605 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 POF1BQ8WVV4 589 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 TAF4BQ92750 862 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 HERC2P3Q9BVR0 1158 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 SDCBP2Q9H190 292 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 SIX2Q9NPC8 291 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 CHST7Q9NS84 486 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 GCNT4Q9P109 453 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 NXF1Q9UBU9 619 aaKnown RBP16.77■□□□□ 0.28
LINC01534-201ENST00000425254 PCDHB8Q9UN66 801 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 L1RE1Q9UN81 338 aa16.77■□□□□ 0.28
LINC01534-201ENST00000425254 R3HCC1Q9Y3T6 440 aaKnown RBP16.77■□□□□ 0.28
LINC01534-201ENST00000425254 SERPINC1P01008 464 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 SOD2P04179 222 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 PAX3P23760 479 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 ASPAP45381 313 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 UBXN1Q04323 297 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 GRIN2CQ14957 1233 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 NR1I3Q14994 352 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 EXOC3L4Q17RC7 722 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 SOWAHAQ2M3V2 549 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 ZNF667Q5HYK9 610 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 WSCD1Q658N2 575 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 PHLDB3Q6NSJ2 640 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 TRIM65Q6PJ69 517 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 ARHGEF19Q8IW93 802 aa16.76■□□□□ 0.27
LINC01534-201ENST00000425254 AUTS2Q8WXX7 1259 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms