RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 GTF2BQ00403 316 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 CUL4AQ13619 759 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 RNF19BQ6ZMZ0 732 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 PDZD4Q76G19 769 aaPredicted RBP19.28■□□□□ 0.68
GPC1-203ENST00000425056 ELMOD1Q8N336 334 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 MSTO1Q9BUK6 570 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 PLA2G2FQ9BZM2 168 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 SEMA4AQ9H3S1 761 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 CEP72Q9P209 647 aa19.28■□□□□ 0.68
GPC1-203ENST00000425056 CPSF3Q9UKF6 684 aaKnown RBP19.28■□□□□ 0.68
GPC1-203ENST00000425056 NRG2O14511 850 aaPredicted RBP19.27■□□□□ 0.68
GPC1-203ENST00000425056 KRT18P05783 430 aaKnown RBP19.27■□□□□ 0.68
GPC1-203ENST00000425056 GUCY2FP51841 1108 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 TWF1Q12792 350 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 SPATA1Q5VX52 437 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 TANGO2Q6ICL3 276 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 IQCEQ6IPM2 695 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 CD302Q8IX05 232 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 LEMD2Q8NC56 503 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 ASB16Q96NS5 453 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 ST6GALNAC4Q9H4F1 302 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 LTB4R2Q9NPC1 389 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 YIPF1Q9Y548 306 aa19.27■□□□□ 0.68
GPC1-203ENST00000425056 TIMM13Q9Y5L4 95 aaPredicted RBP19.27■□□□□ 0.68
GPC1-203ENST00000425056 SPTBN4Q9H254 2564 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 VPS37CA5D8V6 355 aaPredicted RBP19.26■□□□□ 0.67
GPC1-203ENST00000425056 OR6C75A6NL08 312 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 VNN2O95498 520 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 SP9P0CG40 484 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 TYMPP19971 482 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 NMT1P30419 496 aaKnown RBP19.26■□□□□ 0.67
GPC1-203ENST00000425056 UBXN2BQ14CS0 331 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 FAM78AQ5JUQ0 283 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 CYP4A22Q5TCH4 519 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 JADE1Q6IE81 842 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 ZC3H14Q6PJT7 736 aaKnown RBP19.26■□□□□ 0.67
GPC1-203ENST00000425056 USP37Q86T82 979 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 HS6ST3Q8IZP7 471 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 ADSSL1Q8N142 457 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 DNASE1L2Q92874 299 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 ZNF512Q96ME7 567 aaPredicted RBP19.26■□□□□ 0.67
GPC1-203ENST00000425056 BCO2Q9BYV7 579 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 ZHX3Q9H4I2 956 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 ZFP14Q9HCL3 533 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 ASAH2Q9NR71 780 aa19.26■□□□□ 0.67
GPC1-203ENST00000425056 PPEF2O14830 753 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 MOSPD3O75425 235 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 NFICP08651 508 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 OR4Q2P0C623 313 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 PDCP20941 246 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 PAX3P23760 479 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 DDIT3P35638 169 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 MAGEA9P43362 315 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 GPR17Q13304 367 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 PTPAQ15257 358 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 DSTYKQ6XUX3 929 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 TPRG1Q6ZUI0 275 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 MAML2Q8IZL2 1156 aaPredicted RBP19.25■□□□□ 0.67
GPC1-203ENST00000425056 STK17AQ9UEE5 414 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 DERAQ9Y315 318 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 MTF2Q9Y483 593 aaPredicted RBP19.25■□□□□ 0.67
GPC1-203ENST00000425056 R4GN57 208 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 SCN1AP35498 2009 aa19.25■□□□□ 0.67
GPC1-203ENST00000425056 DCHS1Q96JQ0 3298 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 TICRRQ7Z2Z1 1910 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 FAM170BA6NMN3 283 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 LMNAP02545 664 aaKnown RBP19.24■□□□□ 0.67
GPC1-203ENST00000425056 ODC1P11926 461 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 TARSP26639 723 aaKnown RBP19.24■□□□□ 0.67
GPC1-203ENST00000425056 LILRA4P59901 499 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 PLD1Q13393 1074 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 MYBPC2Q14324 1141 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 TMEM132DQ14C87 1099 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 OVOS1Q6IE37 1185 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 USP49Q70CQ1 688 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 KRI1Q8N9T8 703 aaKnown RBP19.24■□□□□ 0.67
GPC1-203ENST00000425056 SMARCD2Q92925 531 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 EPSTI1Q96J88 318 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 PGLYRP2Q96PD5 576 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 CRISPLD1Q9H336 500 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 ASB7Q9H672 318 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 HEBP1Q9NRV9 189 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 FBXO2Q9UK22 296 aaPredicted RBP19.24■□□□□ 0.67
GPC1-203ENST00000425056 C2CD2Q9Y426 696 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 CLIC4Q9Y696 253 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 STYXL1Q9Y6J8 313 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 ZNF292O60281 2723 aa19.24■□□□□ 0.67
GPC1-203ENST00000425056 WDR87Q6ZQQ6 2873 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 ANO9A1A5B4 782 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 SHISA7A6NL88 538 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 TISP43B9A030 160 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 ANKRD63C9JTQ0 380 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 SPTLC1O15269 473 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 MYL4P12829 197 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 CD72P21854 359 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 GRM2Q14416 872 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 ZC2HC1CQ53FD0 456 aaPredicted RBP19.23■□□□□ 0.67
GPC1-203ENST00000425056 C9orf57Q5W0N0 161 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 SLFN12LQ6IEE8 588 aa19.23■□□□□ 0.67
GPC1-203ENST00000425056 SFR1Q86XK3 245 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms