RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 DKC1O60832 514 aaKnown RBP eCLIP16.12■□□□□ 0.173e-6■■□□□ 13.1
C9orf3-204ENST00000424143 TAL1P17542 331 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 PEX3P56589 373 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 XRRA1Q6P2D8 792 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 PCGF5Q86SE9 256 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 VSIG1Q86XK7 387 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 NLGN1Q8N2Q7 840 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 GPD1LQ8N335 351 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ZSWIM2Q8NEG5 633 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ARMC2Q8NEN0 867 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 C10orf82Q8WW14 230 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 NKD2Q969F2 451 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ALKBH8Q96BT7 664 aaKnown RBP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 NAF1Q96HR8 494 aaKnown RBP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 SMC6Q96SB8 1091 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 C1orf112Q9NSG2 853 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 IP6K2Q9UHH9 426 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 EFR3BQ9Y2G0 817 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ATP2A1O14983 1001 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 LIASO43766 372 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 PEX11AO75192 247 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 IL1BP01584 269 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 PTPN4P29074 926 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 NPTX2P47972 431 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 KRT76Q01546 638 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 DMP1Q13316 513 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 EFHC2Q5JST6 749 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 MIS18BP1Q6P0N0 1132 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ABRAQ8N0Z2 381 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ALLCQ8N6M5 410 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 PRCCQ92733 491 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ZNF622Q969S3 477 aaKnown RBP eCLIP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 SLC7A6OSQ96CW6 309 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-204ENST00000424143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.12■□□□□ 0.172e-7■■■□□ 18.7
C9orf3-204ENST00000424143 ACP6Q9NPH0 428 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 ZBTB21Q9ULJ3 1066 aa16.12■□□□□ 0.17
C9orf3-204ENST00000424143 SCN9AQ15858 1988 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 WDR64B1ANS9 1081 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 TJP3O95049 919 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 TPBGLP0DKB5 382 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 T-ENOLP0DO92 83 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 PAX7P23759 505 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.17
C9orf3-204ENST00000424143 NFX1Q12986 1120 aaKnown RBP16.11■□□□□ 0.17
C9orf3-204ENST00000424143 MAMLD1Q13495 774 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 LBRQ14739 615 aaKnown RBP16.11■□□□□ 0.17
C9orf3-204ENST00000424143 PSMD6Q15008 389 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 FKBP1CQ5VVH2 108 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 FAM91A1Q658Y4 838 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 CAPRIN2Q6IMN6 1127 aaKnown RBP16.11■□□□□ 0.17
C9orf3-204ENST00000424143 ACER1Q8TDN7 264 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 LRRC8CQ8TDW0 803 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 CSRNP1Q96S65 589 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 GGT7Q9UJ14 662 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 STK38LQ9Y2H1 464 aa16.11■□□□□ 0.17
C9orf3-204ENST00000424143 GSTTP1A0A1W2PQM5 241 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 GOLGA8IPA6NC78 632 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 GOLGA8JA6NMD2 632 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 TM9SF1O15321 606 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 EXTL3O43909 919 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 FAM155BO75949 473 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 ITGAVP06756 1048 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 KRT5P13647 590 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 ACO1P21399 889 aaKnown RBP16.1■□□□□ 0.17
C9orf3-204ENST00000424143 ECE1P42892 770 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 NOMO3P69849 1222 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 MRPS35P82673 323 aaKnown RBP16.1■□□□□ 0.17
C9orf3-204ENST00000424143 TAP1Q03518 808 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 TMED2Q15363 201 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 SGSM1Q2NKQ1 1148 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 ZACNQ401N2 412 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 SLC39A4Q6P5W5 647 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 CENPUQ71F23 418 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 FAM13CQ8NE31 585 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 ASAP3Q8TDY4 903 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 FAM151AQ8WW52 585 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 CCDC127Q96BQ5 260 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 ERP27Q96DN0 273 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 C9orf72Q96LT7 481 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 DHRS4Q9BTZ2 278 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 VPS11Q9H270 941 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 PCDH9Q9HC56 1237 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 SAYSD1Q9NPB0 183 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 PARVAQ9NVD7 372 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 PSMC3IPQ9P2W1 217 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-204ENST00000424143 STYXL1Q9Y6J8 313 aa16.1■□□□□ 0.17
C9orf3-204ENST00000424143 COL11A2P13942 1736 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-204ENST00000424143 A8MUI8 341 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 ACADSP16219 412 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 ATP6V1C1P21283 382 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 TAS2R40P59535 323 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 UBXN2AP68543 259 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 SATB1Q01826 763 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 TAF11Q15544 211 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 TRIP13Q15645 432 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms