RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
USP49-204ENST00000423567 BMT2Q1RMZ1 405 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 CTXN3Q4LDR2 81 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 CYP26C1Q6V0L0 522 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 CCDC149Q6ZUS6 474 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 GPR149Q86SP6 731 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 ZNF560Q96MR9 790 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 OXCT2Q9BYC2 517 aaPredicted RBP11.84□□□□□ -0.51
USP49-204ENST00000423567 GOLPH3LQ9H4A5 285 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 PIDD1Q9HB75 910 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 ZDHHC7Q9NXF8 308 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 FBXW11Q9UKB1 542 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 TCF20Q9UGU0 1960 aaKnown RBP11.84□□□□□ -0.51
USP49-204ENST00000423567 XIRP2A4UGR9 3374 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 TTC28Q96AY4 2481 aa11.84□□□□□ -0.51
USP49-204ENST00000423567 CCDC195A0A1B0GUA6 201 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 LOC730098B7Z3J9 87 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 M0QZQ0 153 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 CLIC2O15247 247 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 KLRC4O43908 158 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 ZMYND10O75800 440 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 TMEM191BP0C7N4 346 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 ODC1P11926 461 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 ALADP13716 330 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 ELF1P32519 619 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 PNPLA4P41247 253 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 TAF6P49848 677 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 CYP2J2P51589 502 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 EMP3P54852 163 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 ARPP19P56211 112 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 YWHAHQ04917 246 aaPredicted RBP11.83□□□□□ -0.52
USP49-204ENST00000423567 STK4Q13043 487 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 PPM1LQ5SGD2 360 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 C9orf57Q5W0N0 161 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 LILRA6Q6PI73 481 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 XXYLT1Q8NBI6 393 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 SMG7Q92540 1137 aaKnown RBP11.83□□□□□ -0.52
USP49-204ENST00000423567 ANKRD36BP1Q96IX9 119 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 POMKQ9H5K3 350 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 CD320Q9NPF0 282 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 AGPAT3Q9NRZ7 376 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 HOOK1Q9UJC3 728 aaKnown RBP11.83□□□□□ -0.52
USP49-204ENST00000423567 DSEQ9UL01 958 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 CUL9Q8IWT3 2517 aa11.83□□□□□ -0.52
USP49-204ENST00000423567 CITO14578 2027 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 PIRO00625 290 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 EXOC3O60645 756 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 XYLBO75191 536 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 RFPL2O75678 378 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 TNNC2P02585 160 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 C8AP07357 584 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 HNRNPA1P09651 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP49-204ENST00000423567 HOXB1P14653 301 aaPredicted RBP11.82□□□□□ -0.52
USP49-204ENST00000423567 CPB1P15086 417 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 TYMPP19971 482 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 SP100P23497 879 aaPredicted RBP11.82□□□□□ -0.52
USP49-204ENST00000423567 HOXD13P35453 343 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 AARSP49588 968 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP49-204ENST00000423567 LILRA4P59901 499 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 FAM160A1Q05DH4 1040 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 DPYDQ12882 1025 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 SNRNP35Q16560 246 aaKnown RBP11.82□□□□□ -0.52
USP49-204ENST00000423567 UVSSAQ2YD98 709 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 SV2CQ496J9 727 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 SLC8B1Q6J4K2 584 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 RTL10Q7L3V2 364 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 OTOP3Q7RTS5 596 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 METTL23Q86XA0 190 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 EFCAB13Q8IY85 973 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 TDRD5Q8NAT2 981 aaKnown RBP11.82□□□□□ -0.52
USP49-204ENST00000423567 ZSWIM2Q8NEG5 633 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
USP49-204ENST00000423567 FNBP1Q96RU3 617 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 C1QTNF1Q9BXJ1 281 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 RHOBTB2Q9BYZ6 727 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 PRKD2Q9BZL6 878 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 PDE11AQ9HCR9 933 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
USP49-204ENST00000423567 RMND1Q9NWS8 449 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 CHMP5Q9NZZ3 219 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 CDH22Q9UJ99 828 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 FBXL5Q9UKA1 691 aa11.82□□□□□ -0.52
USP49-204ENST00000423567 ANO9A1A5B4 782 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 OR6C75A6NL08 312 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 PRRG1O14668 218 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 PPEF2O14830 753 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 ADAM12O43184 909 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 TGFB1I1O43294 461 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 DCXO43602 365 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 PRPF40AO75400 957 aaKnown RBP11.81□□□□□ -0.52
USP49-204ENST00000423567 RHOBTB3O94955 611 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 OAZ2O95190 189 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 SMC2O95347 1197 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 KRT19P08727 400 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 RBP5P82980 135 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 ROR1Q01973 937 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms