RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 ITGA11Q9UKX5 1188 aa20.23■□□□□ 0.83
MCF2L-214ENST00000423251 ARIH1Q9Y4X5 557 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-214ENST00000423251 TRIM49BA6NDI0 452 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 HIDE1A8MVS5 230 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 IKBKBO14920 756 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 MBTPS2O43462 519 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 DCXO43602 365 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 HOXD11P31277 338 aaPredicted RBP20.22■□□□□ 0.83
MCF2L-214ENST00000423251 BRCC3P46736 316 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 AARSP49588 968 aaKnown RBP eCLIP20.22■□□□□ 0.83
MCF2L-214ENST00000423251 LILRA4P59901 499 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 RBP5P82980 135 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 PTPN14Q15678 1187 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 INTS8Q75QN2 995 aaKnown RBP20.22■□□□□ 0.83
MCF2L-214ENST00000423251 ADGRD2Q7Z7M1 963 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 FAM186BQ8IYM0 893 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 CSGALNACT2Q8N6G5 542 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 OR5B17Q8NGF7 314 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 CXorf38Q8TB03 319 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 PLEKHO2Q8TD55 490 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 SUSD3Q96L08 255 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 CEP63Q96MT8 703 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 CDCA3Q99618 268 aaPredicted RBP20.22■□□□□ 0.83
MCF2L-214ENST00000423251 DUSP9Q99956 384 aaKnown RBP20.22■□□□□ 0.83
MCF2L-214ENST00000423251 TTPALQ9BTX7 342 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 MTMR12Q9C0I1 747 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 TLE6Q9H808 572 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 CTNND2Q9UQB3 1225 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 PCDHGC5Q9Y5F6 944 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 PTPRJQ12913 1337 aa20.22■□□□□ 0.83
MCF2L-214ENST00000423251 C19orf67A6NJJ6 358 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 SYN3O14994 580 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 EPB41P11171 864 aaKnown RBP20.21■□□□□ 0.83
MCF2L-214ENST00000423251 KRT13P13646 458 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 PNPLA4P41247 253 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 VAMP7P51809 220 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 SMAD2Q15796 467 aaKnown RBP20.21■□□□□ 0.83
MCF2L-214ENST00000423251 CT47A1Q5JQC4 288 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-214ENST00000423251 LMBRD2Q68DH5 695 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-214ENST00000423251 PDXDC1Q6P996 788 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 AUTS2Q8WXX7 1259 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 ZNF516Q92618 1163 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 BORCS6Q96GS4 357 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 EMILIN2Q9BXX0 1053 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 RXFP1Q9HBX9 757 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.21■□□□□ 0.83
MCF2L-214ENST00000423251 DACH1Q9UI36 760 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 RWDD2AQ9UIY3 292 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 AGAP1Q9UPQ3 857 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 MUC6Q6W4X9 2439 aa20.21■□□□□ 0.83
MCF2L-214ENST00000423251 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-214ENST00000423251 FSD2A1L4K1 749 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 LRRIQ3A6PVS8 624 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-214ENST00000423251 I3L4J1 428 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 M0QZQ0 153 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 PPEF2O14830 753 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 SLC16A3O15427 465 aaKnown RBP20.2■□□□□ 0.82
MCF2L-214ENST00000423251 ITGB3P05106 788 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 NDUFV1P49821 464 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 TAF6P49848 677 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 CREMQ03060 361 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 SMAD4Q13485 552 aaKnown RBP20.2■□□□□ 0.82
MCF2L-214ENST00000423251 DUSP6Q16828 381 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 KLHL40Q2TBA0 621 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 RTP2Q5QGT7 225 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 TRAPPC11Q7Z392 1133 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 FILIP1Q7Z7B0 1213 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 CEP57Q86XR8 500 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 LRRC52Q8N7C0 313 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 RIN2Q8WYP3 895 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-214ENST00000423251 PIK3R5Q8WYR1 880 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-214ENST00000423251 EEF2KMTQ96G04 330 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 B3GALT6Q96L58 329 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 ZNF560Q96MR9 790 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 TMEM63CQ9P1W3 806 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 FNIP2Q9P278 1114 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 SIX4Q9UIU6 781 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 PCDHB8Q9UN66 801 aa20.2■□□□□ 0.82
MCF2L-214ENST00000423251 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
MCF2L-214ENST00000423251 ARHGEF37A1IGU5 675 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 C2CD2LO14523 706 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 POLR2BP30876 1174 aaKnown RBP20.19■□□□□ 0.82
MCF2L-214ENST00000423251 CA8P35219 290 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 NRIP1P48552 1158 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 STX17P56962 302 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 BFSP1Q12934 665 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 DPCR1Q3MIW9 517 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 DSTYKQ6XUX3 929 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 RBM23Q86U06 439 aaKnown RBP20.19■□□□□ 0.82
MCF2L-214ENST00000423251 APPL2Q8NEU8 664 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 LNX1Q8TBB1 728 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-214ENST00000423251 KLHL5Q96PQ7 755 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 CD207Q9UJ71 328 aa20.19■□□□□ 0.82
MCF2L-214ENST00000423251 PER2O15055 1255 aa20.18■□□□□ 0.82
MCF2L-214ENST00000423251 SPTLC1O15269 473 aa20.18■□□□□ 0.82
MCF2L-214ENST00000423251 CLASP2O75122 1294 aaKnown RBP20.18■□□□□ 0.82
MCF2L-214ENST00000423251 FGFR1OPO95684 399 aaKnown RBP20.18■□□□□ 0.82
MCF2L-214ENST00000423251 C4BPAP04003 597 aaKnown RBP20.18■□□□□ 0.82
MCF2L-214ENST00000423251 KRT19P08727 400 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms