RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SLC26A4O43511 780 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 MICAL2O94851 1124 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 FAM13AO94988 1023 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 KRT18P05783 430 aaKnown RBP17.57■□□□□ 0.4
COL18A1-205ENST00000423214 MYL4P12829 197 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 FCARP24071 287 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 LRPAP1P30533 357 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 DHX8Q14562 1220 aaKnown RBP17.57■□□□□ 0.4
COL18A1-205ENST00000423214 ZNF528Q3MIS6 628 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 FAM78AQ5JUQ0 283 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 DSTYKQ6XUX3 929 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 RNF19BQ6ZMZ0 732 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 LEMD2Q8NC56 503 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 ASB16Q96NS5 453 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 NELL2Q99435 816 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 OXCT2Q9BYC2 517 aaPredicted RBP17.57■□□□□ 0.4
COL18A1-205ENST00000423214 SLITRK6Q9H5Y7 841 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 SMC3Q9UQE7 1217 aa17.57■□□□□ 0.4
COL18A1-205ENST00000423214 TTC26A0AVF1 554 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 M0QZQ0 153 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 SPTLC1O15269 473 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 OGTO15294 1046 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 TBCAO75347 108 aaKnown RBP17.56■□□□□ 0.4
COL18A1-205ENST00000423214 CYP3A5P20815 502 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 SCP2P22307 547 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 UBA7P41226 1012 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 TNFSF9P41273 254 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 CCR2P41597 374 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 CSTF1Q05048 431 aaKnown RBP17.56■□□□□ 0.4
COL18A1-205ENST00000423214 PLD1Q13393 1074 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 ERMP1Q7Z2K6 904 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 KIAA2013Q8IYS2 634 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 MAML2Q8IZL2 1156 aaPredicted RBP17.56■□□□□ 0.4
COL18A1-205ENST00000423214 HS6ST3Q8IZP7 471 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 MYCT1Q8N699 235 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 RUBCNQ92622 972 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 TRMT61BQ9BVS5 477 aaKnown RBP17.56■□□□□ 0.4
COL18A1-205ENST00000423214 HAPLN2Q9GZV7 340 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 ZHX3Q9H4I2 956 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 RPF1Q9H9Y2 349 aaKnown RBP17.56■□□□□ 0.4
COL18A1-205ENST00000423214 PARVGQ9HBI0 331 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 CEP72Q9P209 647 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 NDRG2Q9UN36 371 aaKnown RBP17.56■□□□□ 0.4
COL18A1-205ENST00000423214 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
COL18A1-205ENST00000423214 CACNA1AO00555 2505 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 CEP250Q9BV73 2442 aa17.56■□□□□ 0.4
COL18A1-205ENST00000423214 BMP15O95972 392 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 RPS9P46781 194 aaKnown RBP17.55■□□□□ 0.4
COL18A1-205ENST00000423214 ARSHQ5FYA8 562 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 TMEM130Q8N3G9 435 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 BEST2Q8NFU1 509 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 DEPDC1BQ8WUY9 529 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 SMARCD2Q92925 531 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 IRF7Q92985 503 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 FAM212AQ96EL1 285 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 PGLYRP2Q96PD5 576 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 TBX20Q9UMR3 447 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 PCDHGA2Q9Y5H1 932 aa17.55■□□□□ 0.4
COL18A1-205ENST00000423214 OR6C75A6NL08 312 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 LACTBL1A8MY62 500 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 MAN2B1O00754 1011 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 PIGRP01833 764 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 OR4Q2P0C623 313 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 ODC1P11926 461 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 PSMC3P17980 439 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 PLCG1P19174 1290 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 GDI1P31150 447 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 ABCD1P33897 745 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 GUCY2FP51841 1108 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 EPHB3P54753 998 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 ENOX2Q16206 610 aaKnown RBP17.54■□□□□ 0.4
COL18A1-205ENST00000423214 OVOS1Q6IE37 1185 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 VITQ6UXI7 678 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 ZSCAN18Q8TBC5 510 aaPredicted RBP17.54■□□□□ 0.4
COL18A1-205ENST00000423214 ATRIPQ8WXE1 791 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 CLDN23Q96B33 292 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 TSPAN18Q96SJ8 248 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 MSTO1Q9BUK6 570 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 NCDNQ9UBB6 729 aa17.54■□□□□ 0.4
COL18A1-205ENST00000423214 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
COL18A1-205ENST00000423214 OAZ2O95190 189 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 GJA1P17302 382 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 LONP1P36776 959 aaKnown RBP17.53■□□□□ 0.4
COL18A1-205ENST00000423214 AARSP49588 968 aaKnown RBP eCLIP17.53■□□□□ 0.43e-8■■■■■ 82.4
COL18A1-205ENST00000423214 MCM2P49736 904 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 EPHA5P54756 1037 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 MCM6Q14566 821 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 TEAD2Q15562 447 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 POTEHQ6S545 545 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 YAF2Q8IY57 180 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 KCNN1Q92952 543 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 BORCS6Q96GS4 357 aa17.53■□□□□ 0.4
COL18A1-205ENST00000423214 NRG2O14511 850 aaPredicted RBP17.52■□□□□ 0.4
COL18A1-205ENST00000423214 ZNF263O14978 683 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 TRAK2O60296 914 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 TYMPP19971 482 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 ALDH1A3P47895 512 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 ZNF131P52739 623 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 TMEM132DQ14C87 1099 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 KARSQ15046 597 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms