RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PAK1Q13153 545 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 BIRC3Q13489 604 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 TRPC3Q13507 836 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 VARS2Q5ST30 1063 aaKnown RBP16.99■□□□□ 0.31
BRAT1-202ENST00000421712 TRAPPC11Q7Z392 1133 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 GPR65Q8IYL9 337 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 LNX1Q8TBB1 728 aaPredicted RBP16.99■□□□□ 0.31
BRAT1-202ENST00000421712 PARD3BQ8TEW8 1205 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 SENP8Q96LD8 212 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 RXFP1Q9HBX9 757 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 BARX2Q9UMQ3 279 aaPredicted RBP16.99■□□□□ 0.31
BRAT1-202ENST00000421712 HCFC2Q9Y5Z7 792 aa16.99■□□□□ 0.31
BRAT1-202ENST00000421712 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-202ENST00000421712 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-202ENST00000421712 KPNA7A9QM74 516 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 H3BQ06 376 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-202ENST00000421712 MAPK13O15264 365 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 SPTLC1O15269 473 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 ODC1P11926 461 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 ARPP19P56211 112 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 TFF2Q03403 129 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 YWHAHQ04917 246 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-202ENST00000421712 MYO1EQ12965 1108 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 CLUL1Q15846 466 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 AAK1Q2M2I8 961 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 CTC1Q2NKJ3 1217 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 CTXN3Q4LDR2 81 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 INTS8Q75QN2 995 aaKnown RBP16.98■□□□□ 0.31
BRAT1-202ENST00000421712 METTL23Q86XA0 190 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 TMC2Q8TDI7 906 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 ZNF516Q92618 1163 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 CASP10Q92851 521 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 MMRN2Q9H8L6 949 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 FNIP2Q9P278 1114 aa16.98■□□□□ 0.31
BRAT1-202ENST00000421712 SCN1AP35498 2009 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 PRUNE2Q8WUY3 3088 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 M0QZQ0 153 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 GLUD1P00367 558 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 SPATA31D3P0C874 917 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 EPCAMP16422 314 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 OR1D2P34982 312 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 AP3M2P53677 418 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 DLG4P78352 724 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 DLX2Q07687 328 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-202ENST00000421712 ELMSAN1Q6PJG2 1045 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 SPATA31D4Q6ZUB0 917 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 MLKLQ8NB16 471 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 VN1R2Q8NFZ6 395 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 PLEKHO2Q8TD55 490 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 HPDLQ96IR7 371 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 CLSTN3Q9BQT9 956 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 MKNK1Q9BUB5 465 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 SIX4Q9UIU6 781 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 DSEQ9UL01 958 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 CDY1Q9Y6F8 540 aa16.97■□□□□ 0.31
BRAT1-202ENST00000421712 VWA8A3KMH1 1905 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 TBX10O75333 385 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 GLP2RO95838 553 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 CST3P01034 146 aaPredicted RBP16.96■□□□□ 0.31
BRAT1-202ENST00000421712 TRIM49P0CI25 452 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 TRIM49CP0CI26 452 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 LTBRP36941 435 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 AARSP49588 968 aaKnown RBP eCLIP16.96■□□□□ 0.31
BRAT1-202ENST00000421712 CLCN4P51793 760 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 NLRP12P59046 1061 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 MRPS5P82675 430 aaKnown RBP16.96■□□□□ 0.31
BRAT1-202ENST00000421712 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 CCDC183Q5T5S1 534 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 TCERG1LQ5VWI1 586 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 SCARA3Q6AZY7 606 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 OVOS1Q6IE37 1185 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 ZNF280DQ6N043 979 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.96■□□□□ 0.31
BRAT1-202ENST00000421712 SLC22A17Q8WUG5 538 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
BRAT1-202ENST00000421712 APOL5Q9BWW9 433 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 MTRRQ9UBK8 725 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 DACH1Q9UI36 760 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 CD207Q9UJ71 328 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 SNX9Q9Y5X1 595 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 BACE2Q9Y5Z0 518 aa16.96■□□□□ 0.31
BRAT1-202ENST00000421712 REV3LO60673 3130 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 IKBKBO14920 756 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 SLC16A3O15427 465 aaKnown RBP16.95■□□□□ 0.3
BRAT1-202ENST00000421712 ADAM12O43184 909 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 TGM5O43548 720 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 HUS1O60921 280 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 FGFR1OPO95684 399 aaKnown RBP16.95■□□□□ 0.3
BRAT1-202ENST00000421712 TYMPP19971 482 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 COL19A1Q14993 1142 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 TPD52L1Q16890 204 aaPredicted RBP16.95■□□□□ 0.3
BRAT1-202ENST00000421712 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
BRAT1-202ENST00000421712 TDRD10Q5VZ19 366 aaKnown RBP16.95■□□□□ 0.3
BRAT1-202ENST00000421712 TTI2Q6NXR4 508 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 ANKRD54Q6NXT1 300 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 SASS6Q6UVJ0 657 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 TMEM184AQ6ZMB5 413 aa16.95■□□□□ 0.3
BRAT1-202ENST00000421712 CREBRFQ8IUR6 639 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms