RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 TMEM265A0A087WTH1 108 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 KPNA7A9QM74 516 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 SOX1O00570 391 aaPredicted RBP18.86■□□□□ 0.61
LINC00271-201ENST00000421378 SPTLC1O15269 473 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 SERPINC1P01008 464 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 BRCC3P46736 316 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 ELAVL2Q12926 359 aaKnown RBP18.86■□□□□ 0.61
LINC00271-201ENST00000421378 SGSM1Q2NKQ1 1148 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 APTXQ7Z2E3 356 aaKnown RBP18.86■□□□□ 0.61
LINC00271-201ENST00000421378 RBSNQ9H1K0 784 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 ZNF576Q9H609 170 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 GCNT4Q9P109 453 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 STK39Q9UEW8 545 aa18.86■□□□□ 0.61
LINC00271-201ENST00000421378 GTPBP10A4D1E9 387 aaKnown RBP18.85■□□□□ 0.61
LINC00271-201ENST00000421378 I3L4J1 428 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 STAU1O95793 577 aaKnown RBP18.85■□□□□ 0.61
LINC00271-201ENST00000421378 ASS1P00966 412 aaKnown RBP18.85■□□□□ 0.61
LINC00271-201ENST00000421378 WDR72Q3MJ13 1102 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 TIGD5Q53EQ6 642 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 DDX53Q86TM3 631 aaKnown RBP18.85■□□□□ 0.61
LINC00271-201ENST00000421378 TAF4BQ92750 862 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 SEMA4DQ92854 862 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 PI4K2AQ9BTU6 479 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 GPR62Q9BZJ7 368 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 VRTNQ9H8Y1 702 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 PLXNA4Q9HCM2 1894 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 ALG13Q9NP73 1137 aaKnown RBP18.85■□□□□ 0.61
LINC00271-201ENST00000421378 LGALS16A8MUM7 142 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 H3BNC9 293 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 NOP14P78316 857 aaKnown RBP18.85■□□□□ 0.61
LINC00271-201ENST00000421378 FKBP15Q5T1M5 1219 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 DSTYKQ6XUX3 929 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 SUSD3Q96L08 255 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 VN1R3Q9BXE9 311 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.85■□□□□ 0.61
LINC00271-201ENST00000421378 PUF60Q9UHX1 559 aaKnown RBP18.85■□□□□ 0.61
LINC00271-201ENST00000421378 LZTS1Q9Y250 596 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 SNX9Q9Y5X1 595 aa18.85■□□□□ 0.61
LINC00271-201ENST00000421378 M0QZQ0 153 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 LRRN2O75325 713 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 EFEMP2O95967 443 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 TNNC1P63316 161 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 UBE3AQ05086 875 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 GPM6BQ13491 265 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 EXOC3L4Q17RC7 722 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 FILIP1LQ4L180 1135 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 ZNF667Q5HYK9 610 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 WDR44Q5JSH3 913 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 FAM171A1Q5VUB5 890 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 GBP6Q6ZN66 633 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 RNF168Q8IYW5 571 aaPredicted RBP18.84■□□□□ 0.61
LINC00271-201ENST00000421378 LRCH3Q96II8 777 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 SENP8Q96LD8 212 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 CRACR2AQ9BSW2 395 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 GDAP2Q9NXN4 497 aa18.84■□□□□ 0.61
LINC00271-201ENST00000421378 NXF1Q9UBU9 619 aaKnown RBP18.84■□□□□ 0.61
LINC00271-201ENST00000421378 ARHGEF37A1IGU5 675 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 SOD2P04179 222 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 ODC1P11926 461 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 FANCCQ00597 558 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 HABP4Q5JVS0 413 aaKnown RBP18.83■□□□□ 0.6
LINC00271-201ENST00000421378 SPOPLQ6IQ16 392 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 VPS52Q8N1B4 723 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 SPPL3Q8TCT6 385 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 ELMO3Q96BJ8 720 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 SZT2Q5T011 3432 aa18.83■□□□□ 0.6
LINC00271-201ENST00000421378 EPOPA6NHQ4 379 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 CYB561D2O14569 222 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 SYN3O14994 580 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 HUS1O60921 280 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 P4HA1P13674 534 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 UBXN1Q04323 297 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 USP41Q3LFD5 358 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 ZNF697Q5TEC3 545 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 KIAA1841Q6NSI8 718 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 TRIM65Q6PJ69 517 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.82■□□□□ 0.6
LINC00271-201ENST00000421378 CEP57Q86XR8 500 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 LMO3Q8TAP4 145 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 GDPD5Q8WTR4 605 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 POF1BQ8WVV4 589 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 B3GALT6Q96L58 329 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 MMS19Q96T76 1030 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 HERC2P3Q9BVR0 1158 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 INTS2Q9H0H0 1204 aaKnown RBP18.82■□□□□ 0.6
LINC00271-201ENST00000421378 APOBEC3GQ9HC16 384 aaKnown RBP18.82■□□□□ 0.6
LINC00271-201ENST00000421378 TLR9Q9NR96 1032 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 PCDHB8Q9UN66 801 aa18.82■□□□□ 0.6
LINC00271-201ENST00000421378 COL4A4P53420 1690 aaPredicted RBP18.82■□□□□ 0.6
LINC00271-201ENST00000421378 A0A1B0GTH6 734 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 GRM6O15303 877 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 FGFR3P22607 806 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 TKTP29401 623 aaKnown RBP18.81■□□□□ 0.6
LINC00271-201ENST00000421378 TAS1R1Q7RTX1 841 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 EHBP1Q8NDI1 1231 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 APPL2Q8NEU8 664 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 NT5C1BQ96P26 610 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 TTPALQ9BTX7 342 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 NIF3L1Q9GZT8 377 aa18.81■□□□□ 0.6
LINC00271-201ENST00000421378 TTYH1Q9H313 450 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms