RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 DARS2Q6PI48 645 aaKnown RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ZNF720Q7Z2F6 126 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 REPS2Q8NFH8 660 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ZNF564Q8TBZ8 553 aaPredicted RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 PRMT1Q99873 361 aaKnown RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 PPARGC1AQ9UBK2 798 aaKnown RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 SASH3O75995 380 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 NOP14P78316 857 aaKnown RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 PDE1BQ01064 536 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ANKRD20A4Q4UJ75 823 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ANKRD20A8PQ5CZ79 823 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 PPP6R3Q5H9R7 873 aaPredicted RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ANKRD20A2Q5SQ80 823 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ANKRD20A1Q5TYW2 823 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 KRT80Q6KB66 452 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 SHCBP1Q8NEM2 672 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 XPNPEP3Q9NQH7 507 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ANLNQ9NQW6 1124 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 FGFR1OP2Q9NVK5 253 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 SLC4A7Q9Y6M7 1214 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 TCP11X1B4DZS4 312 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 UPP2O95045 317 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ACTN1P12814 892 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 CHN1P15882 459 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 PNPLA4P41247 253 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 XPO6Q96QU8 1125 aaKnown RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 HMX1Q9NP08 348 aaPredicted RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 TRIM17Q9Y577 477 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 ALS2Q96Q42 1657 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
SCAF8-203ENST00000417268 HAUS5O94927 633 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 TAP1Q03518 808 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 RPS6KA2Q15349 733 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 MMEL1Q495T6 779 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 MPZL3Q6UWV2 235 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 TRIML2Q8N7C3 387 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 IP6K2Q9UHH9 426 aa13.51□□□□□ -0.25
SCAF8-203ENST00000417268 LRP6O75581 1613 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 GIPC1O14908 333 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 TJP3O95049 919 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 ZNF286BP0CG31 522 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 STAG3L1P0CL83 205 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 PCSK1P29120 753 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 SP3Q02447 781 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 SLC20A2Q08357 652 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 FAM102AQ5T9C2 384 aaPredicted RBP13.5□□□□□ -0.25
SCAF8-203ENST00000417268 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 SPATA21Q7Z572 469 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 CDR2LQ86X02 465 aaPredicted RBP13.5□□□□□ -0.25
SCAF8-203ENST00000417268 TTC1Q99614 292 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 NUP85Q9BW27 656 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 NIF3L1Q9GZT8 377 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 ZNF446Q9NWS9 450 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 SSU72P8A0A1W2PR75 194 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 XPAP23025 273 aaPredicted RBP13.5□□□□□ -0.25
SCAF8-203ENST00000417268 KLC1Q07866 573 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 CRYMQ14894 314 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 BBS9Q3SYG4 887 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 PDZD8Q8NEN9 1154 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 NOD2Q9HC29 1040 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 SAYSD1Q9NPB0 183 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 ARL2BPQ9Y2Y0 163 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 KRT7P08729 469 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 MAPTP10636 758 aaKnown RBP13.5□□□□□ -0.25
SCAF8-203ENST00000417268 PSMC6P62333 389 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 GRIK4Q16099 956 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 LRIG3Q6UXM1 1119 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
SCAF8-203ENST00000417268 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.5□□□□□ -0.251e-9■□□□□ 10.8
SCAF8-203ENST00000417268 RFFLQ8WZ73 363 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 HSPH1Q92598 858 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 SETD4Q9NVD3 440 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 IPO11Q9UI26 975 aaKnown RBP13.5□□□□□ -0.25
SCAF8-203ENST00000417268 TFR2Q9UP52 801 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 TTC36A6NLP5 189 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 ZWINTO95229 277 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 VTNP04004 478 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 CCND1P24385 295 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 ADCYAP1R1P41586 468 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 MYBPC2Q14324 1141 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 PLCB4Q15147 1175 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 FOXR1Q6PIV2 292 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 SH3BP5LQ7L8J4 393 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 TRPM8Q7Z2W7 1104 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 LONP2Q86WA8 852 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 SPATA2LQ8IUW3 424 aaPredicted RBP13.5□□□□□ -0.25
SCAF8-203ENST00000417268 ARHGAP18Q8N392 663 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 PPP2R3CQ969Q6 453 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 TTC17Q96AE7 1141 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 NT5C1AQ9BXI3 368 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
SCAF8-203ENST00000417268 CCT8L1PA6NM43 557 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 ZBED1O96006 694 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 SLC9A1P19634 815 aa13.49□□□□□ -0.25
SCAF8-203ENST00000417268 C1orf146Q5VVC0 180 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms