RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 C1RP00736 705 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 PTMSP20962 102 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 NDUFV1P49821 464 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 VAMP7P51809 220 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 CLDN10P78369 228 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 MYO1EQ12965 1108 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 PAK1Q13153 545 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 AAK1Q2M2I8 961 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 PRSS55Q6UWB4 352 aaPredicted RBP24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 TMEM184AQ6ZMB5 413 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 TRAPPC11Q7Z392 1133 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 CASP10Q92851 521 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 SENP8Q96LD8 212 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 DPP7Q9UHL4 492 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 BACE2Q9Y5Z0 518 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 KPNA7A9QM74 516 aa24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 PHACTR2O75167 634 aa24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 ODC1P11926 461 aa24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 PMS1P54277 932 aaKnown RBP24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 VARS2Q5ST30 1063 aaKnown RBP24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 ELMSAN1Q6PJG2 1045 aa24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 OXCT2Q9BYC2 517 aaPredicted RBP24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 DACH1Q9UI36 760 aa24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 DSEQ9UL01 958 aa24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 CTNND2Q9UQB3 1225 aa24.89■■□□□ 1.58
SMARCB1-205ENST00000417137 PDCD11Q14690 1871 aaKnown RBP24.89■■□□□ 1.57
SMARCB1-205ENST00000417137 PTPRJQ12913 1337 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 MYO7AQ13402 2215 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 TRIM49BA6NDI0 452 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 LRRIQ3A6PVS8 624 aaPredicted RBP24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 SLC16A3O15427 465 aaKnown RBP24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 LINC01565O15544 149 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 TYMPP19971 482 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 TRPC3Q13507 836 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 LLGL2Q6P1M3 1020 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 METTL23Q86XA0 190 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 ZC3H3Q8IXZ2 948 aaKnown RBP24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 PLEKHO2Q8TD55 490 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 CEP63Q96MT8 703 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 PRDM6Q9NQX0 595 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 MTRRQ9UBK8 725 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 SIX4Q9UIU6 781 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 HCFC2Q9Y5Z7 792 aa24.88■■□□□ 1.57
SMARCB1-205ENST00000417137 CYB561D2O14569 222 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 SPTLC1O15269 473 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 FGFR1OPO95684 399 aaKnown RBP24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 GLUD1P00367 558 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 KCNA5P22460 613 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 CLCN4P51793 760 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 YWHAHQ04917 246 aaPredicted RBP24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 BFSP1Q12934 665 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 KCNC3Q14003 757 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 MRPL58Q14197 206 aaKnown RBP24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 CCDC183Q5T5S1 534 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 ZNF280DQ6N043 979 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 TTI2Q6NXR4 508 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 FILIP1Q7Z7B0 1213 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 CXorf38Q8TB03 319 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 SLC22A17Q8WUG5 538 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 ATXN2LQ8WWM7 1075 aaKnown RBP24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 ZNF516Q92618 1163 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 EEF2KMTQ96G04 330 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 HPDLQ96IR7 371 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 CLSTN3Q9BQT9 956 aa24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 GZF1Q9H116 711 aaPredicted RBP24.87■■□□□ 1.57
SMARCB1-205ENST00000417137 STX10O60499 249 aa24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 OAZ2O95190 189 aa24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 RPL17P18621 184 aaKnown RBP24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 NLRP12P59046 1061 aa24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 MRPS5P82675 430 aaKnown RBP24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 BIRC3Q13489 604 aa24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 CTXN3Q4LDR2 81 aa24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 FAM84AQ96KN4 292 aa24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 METTL14Q9HCE5 456 aaKnown RBP24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 DZANK1Q9NVP4 752 aa24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 RWDD2AQ9UIY3 292 aa24.86■■□□□ 1.57
SMARCB1-205ENST00000417137 ANK1P16157 1881 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 SPTBN5Q9NRC6 3674 aaKnown RBP24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 HUS1O60921 280 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 GLP2RO95838 553 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 C4BPAP04003 597 aaKnown RBP24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 HOXB8P17481 243 aaPredicted RBP24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 ATICP31939 592 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 OR1D2P34982 312 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 LTBRP36941 435 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 STX17P56962 302 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 DLG4P78352 724 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 OVOS1Q6IE37 1185 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 PALB2Q86YC2 1186 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 GLYCTKQ8IVS8 523 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 VN1R2Q8NFZ6 395 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 HDAC7Q8WUI4 952 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 SYAP1Q96A49 352 aaPredicted RBP24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 BORCS6Q96GS4 357 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 DUSP9Q99956 384 aaKnown RBP24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 GDAP2Q9NXN4 497 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 TIMM13Q9Y5L4 95 aaPredicted RBP24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 PRUNE2Q8WUY3 3088 aa24.85■■□□□ 1.57
SMARCB1-205ENST00000417137 SPDYE4A6NLX3 237 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 CST3P01034 146 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms