RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 PRO3102Q9H379 93 aa8.69□□□□□ -1.02
MDC1-203ENST00000417033 UBN1Q9NPG3 1134 aa8.69□□□□□ -1.02
MDC1-203ENST00000417033 COQ4Q9Y3A0 265 aa8.69□□□□□ -1.02
MDC1-203ENST00000417033 NUB1Q9Y5A7 615 aa8.69□□□□□ -1.02
MDC1-203ENST00000417033 PCDHGA10Q9Y5H3 936 aa8.69□□□□□ -1.02
MDC1-203ENST00000417033 SCN1AP35498 2009 aa8.69□□□□□ -1.02
MDC1-203ENST00000417033 DNAH12Q6ZR08 3092 aa8.69□□□□□ -1.02
MDC1-203ENST00000417033 TDRD15B5MCY1 1934 aaKnown RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 PIRO00625 290 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 HCRTO43612 131 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 TLL1O43897 1013 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 STX10O60499 249 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 N4BP1O75113 896 aaKnown RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 NOL4O94818 638 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 CLSTN1O94985 981 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 ADCY5O95622 1261 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 ASS1P00966 412 aaKnown RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 GALTP07902 379 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 PNMA6AP0CW24 399 aaPredicted RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 CYP3A5P20815 502 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 RAP1GAPP47736 663 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 OR1G1P47890 313 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 NOP14P78316 857 aaKnown RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 GOLGA8FQ08AF8 430 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 GOLGA8DPQ0D2H9 430 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 HSP90AA2PQ14568 343 aaPredicted RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 UPP1Q16831 310 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 EXOC3L4Q17RC7 722 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 ZNF699Q32M78 642 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 FKBP15Q5T1M5 1219 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 TRIM65Q6PJ69 517 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 GBP6Q6ZN66 633 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 FAM43BQ6ZT52 329 aaPredicted RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 NT5DC4Q86YG4 428 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 COLGALT1Q8NBJ5 622 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 FBXL13Q8NEE6 735 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 CACTINQ8WUQ7 758 aaKnown RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 ERGIC2Q96RQ1 377 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 ZBED2Q9BTP6 218 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 VN1R3Q9BXE9 311 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 MRPL9Q9BYD2 267 aaKnown RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 GANQ9H2C0 597 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 MTIF3Q9H2K0 278 aaKnown RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 SMYD3Q9H7B4 428 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 FAM207AQ9NSI2 230 aaPredicted RBP8.68□□□□□ -1.02
MDC1-203ENST00000417033 SLC38A7Q9NVC3 462 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 RAB20Q9NX57 234 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 ITGA11Q9UKX5 1188 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 FHOD1Q9Y613 1164 aa8.68□□□□□ -1.02
MDC1-203ENST00000417033 LINC01553A4QN01 128 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 NRP1O14786 923 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 PMM2O15305 246 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 P4HA2O15460 535 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 MAP3K7O43318 606 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 XPOTO43592 962 aaKnown RBP8.67□□□□□ -1.02
MDC1-203ENST00000417033 B3GAT3O94766 335 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 CALCAP01258 141 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 CA3P07451 260 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 TPM2P07951 284 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 ASPAP45381 313 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 AP3M2P53677 418 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 RBP5P82980 135 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 TRPC3Q13507 836 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 FILIP1LQ4L180 1135 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 TIGD5Q53EQ6 642 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 SPOUT1Q5T280 376 aaKnown RBP8.67□□□□□ -1.02
MDC1-203ENST00000417033 IQCEQ6IPM2 695 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 PHLDB3Q6NSJ2 640 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 RRAGAQ7L523 313 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 USP37Q86T82 979 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 OSTM1Q86WC4 334 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 VSTM4Q8IW00 320 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 EHBP1Q8NDI1 1231 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 PHOSPHO2Q8TCD6 241 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 HPDLQ96IR7 371 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 B3GALT6Q96L58 329 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 KREMEN1Q96MU8 473 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 FAM193BQ96PV7 902 aaPredicted RBP8.67□□□□□ -1.02
MDC1-203ENST00000417033 RAD9AQ99638 391 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 C17orf80Q9BSJ5 609 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 KIAA1671Q9BY89 1806 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 NKX2-4Q9H2Z4 354 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 KANSL3Q9P2N6 904 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
MDC1-203ENST00000417033 HMGXB4Q9UGU5 601 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 LHX6Q9UPM6 363 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 NME7Q9Y5B8 376 aa8.67□□□□□ -1.02
MDC1-203ENST00000417033 TIMM13Q9Y5L4 95 aaPredicted RBP8.67□□□□□ -1.02
MDC1-203ENST00000417033 GBF1Q92538 1859 aa8.66□□□□□ -1.02
MDC1-203ENST00000417033 GTPBP10A4D1E9 387 aaKnown RBP8.66□□□□□ -1.02
MDC1-203ENST00000417033 CBFA2T2O43439 604 aa8.66□□□□□ -1.02
MDC1-203ENST00000417033 CSPG5O95196 566 aa8.66□□□□□ -1.02
MDC1-203ENST00000417033 BMP8BP34820 402 aa8.66□□□□□ -1.02
MDC1-203ENST00000417033 AARSP49588 968 aaKnown RBP eCLIP8.66□□□□□ -1.02
MDC1-203ENST00000417033 TAF6P49848 677 aa8.66□□□□□ -1.02
MDC1-203ENST00000417033 CDR1P51861 262 aa8.66□□□□□ -1.02
MDC1-203ENST00000417033 CDH8P55286 799 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms