RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 L7N2F9 121 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 KIF2AO00139 706 aaPredicted RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 O00370 1275 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PODXLO00592 558 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ZNF862O60290 1169 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 DNAJA2O60884 412 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SMPD2O60906 423 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PHF2O75151 1096 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SIN3BO75182 1162 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PEX11AO75192 247 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TBX10O75333 385 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT38O76015 456 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SLITRK3O94933 977 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CCNDBP1O95273 360 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 METTL18O95568 372 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 MLYCDO95822 493 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ADH1CP00326 375 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PAHP00439 452 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 FTLP02792 175 aaPredicted RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ITGA5P08648 1049 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GSTP1P09211 210 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TPM1P09493 284 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CSF1P09603 554 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GPR89BP0CG08 455 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ZNF853P0CG23 659 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 RARAP10276 462 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PDHBP11177 359 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 COL6A2P12110 1019 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CKBP12277 381 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 FGFR2P21802 821 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CTSSP25774 331 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC7A1P30825 629 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GPC1P35052 558 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PSMB10P40306 273 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 BUD31P41223 144 aaPredicted RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SKIV2L2P42285 1042 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PAFAH1B1P43034 410 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PTGIRP43119 386 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 RPIAP49247 311 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 AMPHP49418 695 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 HNMTP50135 292 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ETV1P50549 477 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 DNM2P50570 870 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CCR5P51681 352 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ARFIP1P53367 373 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC12A3P55017 1021 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 HERVK_113P62684 666 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ERVK-24P63145 666 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 DLG4P78352 724 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CCNA1P78396 465 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 MRPS9P82933 396 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 FMO1Q01740 532 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CYP4A11Q02928 519 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GABPB1Q06547 395 aaPredicted RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 KIF5AQ12840 1032 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GRSF1Q12849 480 aaKnown RBP eCLIP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 RPA4Q13156 261 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SGCGQ13326 291 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CCINQ13939 588 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SPIDRQ14159 915 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PDCD1Q15116 288 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TRADDQ15628 312 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SF1Q15637 639 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GPR68Q15743 365 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 BAK1Q16611 211 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 KIF4BQ2VIQ3 1234 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SUPT20HL1Q3ZLR7 823 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC152Q4G0S7 254 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 C4orf17Q53FE4 359 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TDRD12Q587J7 1177 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 BMP2KLQ5H9B9 411 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TEX35Q5T0J7 233 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC9C2Q5TAH2 1124 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 DCAF15Q66K64 600 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CIAPIN1Q6FI81 312 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 OTUD7BQ6GQQ9 843 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 WDR93Q6P2C0 686 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 FDX2Q6P4F2 183 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC22A25Q6T423 547 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 KCNT2Q6UVM3 1135 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ATF7IPQ6VMQ6 1270 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SYNE3Q6ZMZ3 975 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 BBS12Q6ZW61 710 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 DHX32Q7L7V1 743 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 RAB11FIP2Q7L804 512 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CHST3Q7LGC8 479 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 OTOP1Q7RTM1 612 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 OVCH1Q7RTY7 1134 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GATAD2AQ86YP4 633 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SCN4BQ8IWT1 228 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 DIS3L2Q8IYB7 885 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC105Q8IYK2 499 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 DCLK2Q8N568 766 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 USP38Q8NB14 1042 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ADCY4Q8NFM4 1077 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 OR10H5Q8NGA6 315 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 OR52K1Q8NGK4 314 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PSMA8Q8TAA3 256 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PCDH19Q8TAB3 1148 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SETD6Q8TBK2 473 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms