RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 CTCFP49711 727 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 CDK7P50613 346 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 LBX1P52954 281 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 MFAP3P55082 362 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 AMPD2Q01433 879 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 SATB1Q01826 763 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 GCNT1Q02742 428 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 ARID5AQ03989 594 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 KLHL30Q0D2K2 578 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 NFX1Q12986 1120 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 TRPC3Q13507 836 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 NCOA4Q13772 614 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 PKN2Q16513 984 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 ARHGAP44Q17R89 818 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 TDRD12Q587J7 1177 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 FBXO47Q5MNV8 452 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 UBXN11Q5T124 520 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 ZNF618Q5T7W0 954 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 PAPD7Q5XG87 772 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 HGSNATQ68CP4 663 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 TWF2Q6IBS0 349 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 JADE1Q6IE81 842 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 FOXR1Q6PIV2 292 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 TOGARAM2Q6ZUX3 1019 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 ENOSF1Q7L5Y1 443 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 IRF2BP2Q7Z5L9 587 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 NT5DC4Q86YG4 428 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 GPIHBP1Q8IV16 184 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 CCDC50Q8IVM0 306 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 ARHGEF19Q8IW93 802 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 PPM1KQ8N3J5 372 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 USP38Q8NB14 1042 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 C3orf20Q8ND61 904 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 HELQQ8TDG4 1101 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 U2AF1L4Q8WU68 220 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 TATDN2Q93075 761 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 ARMC5Q96C12 935 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 ZNF333Q96JL9 665 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 CCDC42Q96M95 316 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 NAPGQ99747 312 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 DESI2Q9BSY9 194 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 PI4K2AQ9BTU6 479 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 IMPG2Q9BZV3 1241 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 MTMR12Q9C0I1 747 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 CRISPLD2Q9H0B8 497 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 NXF3Q9H4D5 531 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 FAM204AQ9H8W3 233 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 AGO3Q9H9G7 860 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 NHEJ1Q9H9Q4 299 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 PLEKHA5Q9HAU0 1116 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.68□□□□□ -1.342e-7■■■■■ 139.7
ITGB1-203ENST00000414670 C1orf112Q9NSG2 853 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 PADI3Q9ULW8 664 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 C2CD2Q9Y426 696 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 BZW2Q9Y6E2 419 aaKnown RBP6.68□□□□□ -1.34
ITGB1-203ENST00000414670 SQORQ9Y6N5 450 aa6.68□□□□□ -1.34
ITGB1-203ENST00000414670 FOXN3O00409 490 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 EVI5O60447 810 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 RECQL4O94761 1208 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 GFPT2O94808 682 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 SGPL1O95470 568 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 ASS1P00966 412 aaKnown RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 CST3P01034 146 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 TFRCP02786 760 aaKnown RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 HSPA1AP0DMV8 641 aaKnown RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 HSPA1BP0DMV9 641 aaKnown RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 CKBP12277 381 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 CD52P31358 61 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 ARHGAP25P42331 645 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 KIF11P52732 1056 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 VSNL1P62760 191 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 NOP14P78316 857 aaKnown RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 KRT83P78385 493 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 PAK2Q13177 524 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 BFSP2Q13515 415 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 LPIN1Q14693 890 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 TMEM132DQ14C87 1099 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 SPA17Q15506 151 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 SGSM1Q2NKQ1 1148 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 WLSQ5T9L3 541 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 MICALCLQ6ZW33 695 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 ZNF572Q7Z3I7 529 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 FAM126BQ8IXS8 530 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 HACE1Q8IYU2 909 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 SMG8Q8ND04 991 aaKnown RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 ACRBPQ8NEB7 543 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 CAGE1Q8TC20 777 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 SHC3Q92529 594 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 TAF4BQ92750 862 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 KAT5Q92993 513 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 ELMO3Q96BJ8 720 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 KIF12Q96FN5 646 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 CABS1Q96KC9 395 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 SNX27Q96L92 541 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 KREMEN1Q96MU8 473 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 TSPAN18Q96SJ8 248 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 APOL6Q9BWW8 343 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 GPR88Q9GZN0 384 aa6.67□□□□□ -1.34
ITGB1-203ENST00000414670 APOBEC3GQ9HC16 384 aaKnown RBP6.67□□□□□ -1.34
ITGB1-203ENST00000414670 ERVK-5Q9HDB9 667 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms