RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TRANK1O15050 2925 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 CYP3A7-CYP3A51PA0A087WV96 503 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 WDR64B1ANS9 1081 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 PRODHO43272 600 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 NBNO60934 754 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 PPM1BO75688 479 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 PSMD10O75832 226 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 TIAF1O95411 115 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 S100BP04271 92 aaPredicted RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 IQCF3P0C7M6 154 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 FGFR1P11362 822 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 PABPC1P11940 636 aaKnown RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 POU3F3P20264 500 aaPredicted RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 CYP3A7P24462 503 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 MCM7P33993 719 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 GRIA2P42262 883 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 PRKCEQ02156 737 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 BFSP2Q13515 415 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 MBTPS1Q14703 1052 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 ZNF174Q15697 407 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 TRIM71Q2Q1W2 868 aaKnown RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 FNDC3BQ53EP0 1204 aaKnown RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 CT47A1Q5JQC4 288 aaPredicted RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 TMEM240Q5SV17 173 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 MARCH8Q5T0T0 291 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 FAM160B1Q5W0V3 765 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 NCAPH2Q6IBW4 605 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 MIS18BP1Q6P0N0 1132 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 IGF2-ASQ6U949 168 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 Q7L0L9 218 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 LRRC8DQ7L1W4 858 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 ARMCX6Q7L4S7 300 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 TMCO2Q7Z6W1 182 aaPredicted RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 SERINC5Q86VE9 423 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 DDX42Q86XP3 938 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS41-205ENST00000414632 C2CD4AQ8NCU7 369 aaPredicted RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 FBXO18Q8NFZ0 1043 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 ETNPPLQ8TBG4 499 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 DNAJB3Q8WWF6 145 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 ZNF668Q96K58 619 aaPredicted RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 IER2Q9BTL4 223 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 SEZ6LQ9BYH1 1024 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 FTOQ9C0B1 505 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS41-205ENST00000414632 MKRN2Q9H000 416 aaKnown RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 GBP3Q9H0R5 595 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 GSX1Q9H4S2 264 aaPredicted RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 FAM105AQ9NUU6 356 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 TYW1Q9NV66 732 aaKnown RBP5.46□□□□□ -1.54
VPS41-205ENST00000414632 TUBE1Q9UJT0 475 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 VAV3Q9UKW4 847 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 CEP131Q9UPN4 1083 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 SMC3Q9UQE7 1217 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 PCDHA10Q9Y5I2 948 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 IGSF9BQ9UPX0 1349 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 CHD7Q9P2D1 2997 aa5.46□□□□□ -1.54
VPS41-205ENST00000414632 EYSQ5T1H1 3165 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 CDH23Q9H251 3354 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 A0A087WWV3 80 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 IGKV6D-21A0A0A0MT36 114 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 VPS37CA5D8V6 355 aaPredicted RBP5.45□□□□□ -1.54
VPS41-205ENST00000414632 RSPH10B2B2RC85 870 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 H3BQV1 296 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 TBX1O43435 398 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 NEMFO60524 1076 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 LRIG2O94898 1065 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 FGBP02675 491 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 CAPNS1P04632 268 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 RSPH10BP0C881 870 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 GNAT1P11488 350 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 CD247P20963 164 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 HOXC8P31273 242 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 SOX5P35711 763 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 TXKP42681 527 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 MCM2P49736 904 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 CDKN1CP49918 316 aaPredicted RBP5.45□□□□□ -1.54
VPS41-205ENST00000414632 RABGGTBP53611 331 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 ADAM17P78536 824 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 NFKB2Q00653 900 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 CYP4A11Q02928 519 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 AUHQ13825 339 aaKnown RBP5.45□□□□□ -1.54
VPS41-205ENST00000414632 GPNMBQ14956 572 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 CALCRLQ16602 461 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 TTC38Q5R3I4 469 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 PLA2G4FQ68DD2 849 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 PPP4R3AQ6IN85 833 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 FDX2Q6P4F2 183 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 PSRC1Q6PGN9 363 aaPredicted RBP5.45□□□□□ -1.54
VPS41-205ENST00000414632 MOXD1Q6UVY6 613 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 PLPPR4Q7Z2D5 763 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 NOSTRINQ8IVI9 506 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 SMAP1Q8IYB5 467 aaPredicted RBP5.45□□□□□ -1.54
VPS41-205ENST00000414632 LRRC71Q8N4P6 559 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 MFSD2AQ8NA29 543 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 BVESQ8NE79 360 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 DNAJB8Q8NHS0 232 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 CAGE1Q8TC20 777 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 AFAP1L1Q8TED9 768 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 ATP8B4Q8TF62 1192 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms