RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 FAM26FQ5R3K3 315 aa28.5■■■□□ 2.15
VEGFA-207ENST00000413642 SCARA3Q6AZY7 606 aa28.5■■■□□ 2.15
VEGFA-207ENST00000413642 SENP8Q96LD8 212 aa28.5■■■□□ 2.15
VEGFA-207ENST00000413642 SPATA32Q96LK8 384 aa28.5■■■□□ 2.15
VEGFA-207ENST00000413642 DNMT3BQ9UBC3 853 aaKnown RBP28.5■■■□□ 2.15
VEGFA-207ENST00000413642 PDCD11Q14690 1871 aaKnown RBP28.5■■■□□ 2.15
VEGFA-207ENST00000413642 OAZ2O95190 189 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 PDGFBP01127 241 aaPredicted RBP28.49■■■□□ 2.15
VEGFA-207ENST00000413642 ATF2P15336 505 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 KRT85P78386 507 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 POU5F1Q01860 360 aaKnown RBP28.49■■■□□ 2.15
VEGFA-207ENST00000413642 YWHAHQ04917 246 aaPredicted RBP28.49■■■□□ 2.15
VEGFA-207ENST00000413642 ARMCX5Q6P1M9 558 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 UNC13DQ70J99 1090 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 EPM2AIP1Q7L775 607 aaPredicted RBP28.49■■■□□ 2.15
VEGFA-207ENST00000413642 BRSK2Q8IWQ3 736 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 MAGEF1Q9HAY2 307 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 CYP4F11Q9HBI6 524 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 EPS15L1Q9UBC2 864 aa28.49■■■□□ 2.15
VEGFA-207ENST00000413642 PRRG1O14668 218 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 ACTN4O43707 911 aaKnown RBP28.48■■■□□ 2.15
VEGFA-207ENST00000413642 EXTL3O43909 919 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 XYLBO75191 536 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 IL18RAPO95256 599 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 PFKFB1P16118 471 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 ELF1P32519 619 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 EHHADHQ08426 723 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 RNF19BQ6ZMZ0 732 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 BMP8AQ7Z5Y6 402 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 ITFG1Q8TB96 612 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 RBAKQ9NYW8 714 aaPredicted RBP28.48■■■□□ 2.15
VEGFA-207ENST00000413642 HCN4Q9Y3Q4 1203 aa28.48■■■□□ 2.15
VEGFA-207ENST00000413642 LAMP2P13473 410 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 CPB1P15086 417 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 TFAMQ00059 246 aaKnown RBP28.47■■■□□ 2.15
VEGFA-207ENST00000413642 ADCY1Q08828 1119 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 STXBP4Q6ZWJ1 553 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 USP37Q86T82 979 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 NELFCDQ8IXH7 590 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 TCEAL8Q8IYN2 117 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 UBALD2Q8IYN6 164 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 ZNF507Q8TCN5 953 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 PAGE5Q96GU1 130 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 PDE11AQ9HCR9 933 aa28.47■■■□□ 2.15
VEGFA-207ENST00000413642 MTCL1Q9Y4B5 1905 aaKnown RBP28.46■■■□□ 2.15
VEGFA-207ENST00000413642 ARHGEF37A1IGU5 675 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 VNN2O95498 520 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 LDHAP00338 332 aaKnown RBP28.46■■■□□ 2.15
VEGFA-207ENST00000413642 SLFN14P0C7P3 912 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 CMA1P23946 247 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 TDGQ13569 410 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 OVOS1Q6IE37 1185 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 CEP57L1Q8IYX8 460 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 SCFD1Q8WVM8 642 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 MFSD14AQ96MC6 490 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 TMEM209Q96SK2 561 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 SLC39A2Q9NP94 309 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.46■■■□□ 2.154e-7■■■■■ 28.5
VEGFA-207ENST00000413642 INSL5Q9Y5Q6 135 aa28.46■■■□□ 2.15
VEGFA-207ENST00000413642 EIF3DO15371 548 aaKnown RBP eCLIP28.45■■■□□ 2.14
VEGFA-207ENST00000413642 TGFB1I1O43294 461 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 NARSO43776 548 aaKnown RBP28.45■■■□□ 2.14
VEGFA-207ENST00000413642 POU2F2P09086 479 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 TYMPP19971 482 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 CDR1P51861 262 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 TPGS2Q68CL5 300 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 CBWD2Q8IUF1 395 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 GPD1LQ8N335 351 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 BORCS6Q96GS4 357 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 PGLYRP2Q96PD5 576 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 AFF4Q9UHB7 1163 aaKnown RBP28.45■■■□□ 2.14
VEGFA-207ENST00000413642 HPSEQ9Y251 543 aa28.45■■■□□ 2.14
VEGFA-207ENST00000413642 LRG1P02750 347 aa28.44■■■□□ 2.14
VEGFA-207ENST00000413642 ODC1P11926 461 aa28.44■■■□□ 2.14
VEGFA-207ENST00000413642 PABPC1LQ4VXU2 614 aaKnown RBP28.44■■■□□ 2.14
VEGFA-207ENST00000413642 LMBRD2Q68DH5 695 aaPredicted RBP28.44■■■□□ 2.14
VEGFA-207ENST00000413642 RTL10Q7L3V2 364 aa28.44■■■□□ 2.14
VEGFA-207ENST00000413642 ING5Q8WYH8 240 aa28.44■■■□□ 2.14
VEGFA-207ENST00000413642 FGF13Q92913 245 aa28.44■■■□□ 2.14
VEGFA-207ENST00000413642 PYM1Q9BRP8 204 aaKnown RBP28.44■■■□□ 2.14
VEGFA-207ENST00000413642 GDPD2Q9HCC8 539 aa28.44■■■□□ 2.14
VEGFA-207ENST00000413642 IGSF9Q9P2J2 1179 aa28.44■■■□□ 2.14
VEGFA-207ENST00000413642 PVALEFA0A1B0GWK0 134 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 CYB561D2O14569 222 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 CLIC2O15247 247 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 KLRC4O43908 158 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 TAF6P49848 677 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 SLC5A9Q2M3M2 681 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 NT5DC4Q86YG4 428 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 FBXL6Q8N531 539 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 C1orf127Q8N9H9 656 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 RPP25Q9BUL9 199 aaKnown RBP28.43■■■□□ 2.14
VEGFA-207ENST00000413642 CRISPLD1Q9H336 500 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 HSPBP1Q9NZL4 362 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 CDH7Q9ULB5 785 aa28.43■■■□□ 2.14
VEGFA-207ENST00000413642 OR6C75A6NL08 312 aa28.42■■■□□ 2.14
VEGFA-207ENST00000413642 ITGB3P05106 788 aa28.42■■■□□ 2.14
VEGFA-207ENST00000413642 RHOP08100 348 aa28.42■■■□□ 2.14
VEGFA-207ENST00000413642 POLR2BP30876 1174 aaKnown RBP28.42■■■□□ 2.14
VEGFA-207ENST00000413642 BECN1Q14457 450 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms