RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TBX20Q9UMR3 447 aa18.45■□□□□ 0.54
PTPRC-206ENST00000413409 PLXNA4Q9HCM2 1894 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 MYH9P35579 1960 aaKnown RBP18.44■□□□□ 0.54
PTPRC-206ENST00000413409 H2AFXP16104 143 aaPredicted RBP18.44■□□□□ 0.54
PTPRC-206ENST00000413409 FERP16591 822 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 APBA1Q02410 837 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 KCNC3Q14003 757 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 DUSP6Q16828 381 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 PAN2Q504Q3 1202 aaKnown RBP18.44■□□□□ 0.54
PTPRC-206ENST00000413409 IQCEQ6IPM2 695 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 KCNV1Q6PIU1 500 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 IRF2BP2Q7Z5L9 587 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 UBALD2Q8IYN6 164 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 CMTR2Q8IYT2 770 aaKnown RBP18.44■□□□□ 0.54
PTPRC-206ENST00000413409 RNF10Q8N5U6 811 aaKnown RBP18.44■□□□□ 0.54
PTPRC-206ENST00000413409 RABGGTAQ92696 567 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 ALS2CR12Q96Q35 445 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 XPNPEP1Q9NQW7 623 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 ZNF302Q9NR11 478 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 SORCS3Q9UPU3 1222 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 SPTBN2O15020 2390 aa18.44■□□□□ 0.54
PTPRC-206ENST00000413409 BTNL10A8MVZ5 291 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 TRIM49P0CI25 452 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 TRIM49CP0CI26 452 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 GATMP50440 423 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 MGAT3Q09327 533 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 MTMR3Q13615 1198 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 EMC2Q15006 297 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 RUFY4Q6ZNE9 571 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 CYFIP1Q7L576 1253 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 GPR161Q8N6U8 529 aaKnown RBP18.43■□□□□ 0.54
PTPRC-206ENST00000413409 BSNDQ8WZ55 320 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 IFT74Q96LB3 600 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 CBWD1Q9BRT8 395 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 NIFKQ9BYG3 293 aaKnown RBP18.43■□□□□ 0.54
PTPRC-206ENST00000413409 ARHGAP28Q9P2N2 729 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 USP20Q9Y2K6 914 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 TELO2Q9Y4R8 837 aa18.43■□□□□ 0.54
PTPRC-206ENST00000413409 DENND3A2RUS2 1198 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 CCDC169A6NNP5 214 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 PI15O43692 258 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 RFC5P40937 340 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 STAT1P42224 750 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 CLCN5P51795 746 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 VAMP7P51809 220 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 ERVFC1P60507 584 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 GFPT1Q06210 699 aaPredicted RBP18.42■□□□□ 0.54
PTPRC-206ENST00000413409 CETN1Q12798 172 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 HSP90AA2PQ14568 343 aaPredicted RBP18.42■□□□□ 0.54
PTPRC-206ENST00000413409 CBWD6Q4V339 395 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 CBWD3Q5JTY5 395 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 CBWD5Q5RIA9 395 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 FAM160B1Q5W0V3 765 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 ANKRD54Q6NXT1 300 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 METTL7BQ6UX53 244 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 TMEM184AQ6ZMB5 413 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 TRIM50Q86XT4 487 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 MICAL1Q8TDZ2 1067 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 LMBR1Q8WVP7 490 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 SH2D3AQ9BRG2 576 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 STK33Q9BYT3 514 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 POLR3FQ9H1D9 316 aaPredicted RBP18.42■□□□□ 0.54
PTPRC-206ENST00000413409 MLXIPQ9HAP2 919 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 APEX2Q9UBZ4 518 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 NENFQ9UMX5 172 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 TFR2Q9UP52 801 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 JRKLQ9Y4A0 524 aa18.42■□□□□ 0.54
PTPRC-206ENST00000413409 MACROD2A1Z1Q3 448 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 C2CD4DB7Z1M9 353 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 F8VZ95 297 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 GARTP22102 1010 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 SP4Q02446 784 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 CKAP4Q07065 602 aaKnown RBP18.41■□□□□ 0.54
PTPRC-206ENST00000413409 FBXO47Q5MNV8 452 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 FBXO38Q6PIJ6 1188 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 VPS36Q86VN1 386 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 KIAA2013Q8IYS2 634 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 FAM167AQ96KS9 214 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 DHX33Q9H6R0 707 aaKnown RBP18.41■□□□□ 0.54
PTPRC-206ENST00000413409 AGO3Q9H9G7 860 aaKnown RBP18.41■□□□□ 0.54
PTPRC-206ENST00000413409 ARGLU1Q9NWB6 273 aaPredicted RBP18.41■□□□□ 0.54
PTPRC-206ENST00000413409 AJAP1Q9UKB5 411 aaPredicted RBP18.41■□□□□ 0.54
PTPRC-206ENST00000413409 SAR1BQ9Y6B6 198 aa18.41■□□□□ 0.54
PTPRC-206ENST00000413409 OTOGLQ3ZCN5 2332 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 GSTTP1A0A1W2PQM5 241 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 TISP43B9A030 160 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 ATP1A1P05023 1023 aaKnown RBP18.4■□□□□ 0.54
PTPRC-206ENST00000413409 ASGR2P07307 311 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 CCDC172P0C7W6 258 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 GNAT1P11488 350 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 ATP4AP20648 1035 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 SOX5P35711 763 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 POLGP54098 1239 aaPredicted RBP18.4■□□□□ 0.54
PTPRC-206ENST00000413409 MTERF2Q49AM1 385 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 TEX35Q5T0J7 233 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 CWF19L1Q69YN2 538 aaKnown RBP18.4■□□□□ 0.54
PTPRC-206ENST00000413409 USP37Q86T82 979 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 TMC2Q8TDI7 906 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 NOX5Q96PH1 765 aa18.4■□□□□ 0.54
PTPRC-206ENST00000413409 PCIF1Q9H4Z3 704 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms