RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 RAB20Q9NX57 234 aa9.63□□□□□ -0.87
HCG18-234ENST00000413358 KANSL3Q9P2N6 904 aa9.63□□□□□ -0.87
HCG18-234ENST00000413358 PLAGL2Q9UPG8 496 aa9.63□□□□□ -0.87
HCG18-234ENST00000413358 PDCD11Q14690 1871 aaKnown RBP9.63□□□□□ -0.87
HCG18-234ENST00000413358 PRRC2BQ5JSZ5 2229 aaKnown RBP9.62□□□□□ -0.87
HCG18-234ENST00000413358 TTC3P53804 2025 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 LCHNA4D1U4 455 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 LINC01553A4QN01 128 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 PODXLO00592 558 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 LPXNO60711 386 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 ZC3H11AO75152 810 aaKnown RBP eCLIP9.62□□□□□ -0.87
HCG18-234ENST00000413358 ARHGEF15O94989 841 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 VNN1O95497 513 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 P4HA1P13674 534 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 ALADP13716 330 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 KCNA5P22460 613 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 RFX1P22670 979 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 PNPLA4P41247 253 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 KLK7P49862 253 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 GATMP50440 423 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 AFF1P51825 1210 aaKnown RBP9.62□□□□□ -0.87
HCG18-234ENST00000413358 MCCD1P59942 119 aaPredicted RBP9.62□□□□□ -0.87
HCG18-234ENST00000413358 TNNC1P63316 161 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 NOP14P78316 857 aaKnown RBP9.62□□□□□ -0.87
HCG18-234ENST00000413358 RBP5P82980 135 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 LRMPQ12912 555 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 MYO1EQ12965 1108 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 TUSC3Q13454 348 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 LEXMQ3ZCV2 418 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 SPOUT1Q5T280 376 aaKnown RBP9.62□□□□□ -0.87
HCG18-234ENST00000413358 TRIM65Q6PJ69 517 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 SCARA5Q6ZMJ2 495 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 CACNA2D4Q7Z3S7 1137 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 TMCO2Q7Z6W1 182 aaPredicted RBP9.62□□□□□ -0.87
HCG18-234ENST00000413358 PPFIBP1Q86W92 1011 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 LRRC52Q8N7C0 313 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 SPC24Q8NBT2 197 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 IQCDQ96DY2 449 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 UROC1Q96N76 676 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 PI4K2AQ9BTU6 479 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 UBE2ZQ9H832 354 aaPredicted RBP9.62□□□□□ -0.87
HCG18-234ENST00000413358 TBC1D13Q9NVG8 400 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 APEX2Q9UBZ4 518 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 AGAP1Q9UPQ3 857 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 SIK3Q9Y2K2 1263 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 COQ4Q9Y3A0 265 aa9.62□□□□□ -0.87
HCG18-234ENST00000413358 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.62□□□□□ -0.872e-6■■■■□ 23.1
HCG18-234ENST00000413358 PI4K2BG5E9Z4 385 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 PTMAP06454 111 aaKnown RBP9.61□□□□□ -0.87
HCG18-234ENST00000413358 SLC9A1P19634 815 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 PON1P27169 355 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 LRPAP1P30533 357 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 ATICP31939 592 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 PBX1P40424 430 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 OR1G1P47890 313 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 TAF6P49848 677 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 MYL6P60660 151 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 SOX4Q06945 474 aaPredicted RBP9.61□□□□□ -0.87
HCG18-234ENST00000413358 RAPGEF1Q13905 1077 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 ZBTB6Q15916 424 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 SGSM1Q2NKQ1 1148 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 SV2CQ496J9 727 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 TIGD5Q53EQ6 642 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 ZNF667Q5HYK9 610 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 C9orf57Q5W0N0 161 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
HCG18-234ENST00000413358 GJD3Q8N144 294 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 TMEM130Q8N3G9 435 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 PPM1KQ8N3J5 372 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 EHBP1Q8NDI1 1231 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 GSTCDQ8NEC7 633 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 TAF4BQ92750 862 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 SEMA4DQ92854 862 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 TOP1MTQ969P6 601 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 HPDLQ96IR7 371 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 CASD1Q96PB1 797 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 SPAG5Q96R06 1193 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 NUP58Q9BVL2 599 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 NIF3L1Q9GZT8 377 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 PLCB1Q9NQ66 1216 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 MIOSQ9NXC5 875 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 SIX4Q9UIU6 781 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 DAAM1Q9Y4D1 1078 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 NUB1Q9Y5A7 615 aa9.61□□□□□ -0.87
HCG18-234ENST00000413358 TDRD15B5MCY1 1934 aaKnown RBP9.6□□□□□ -0.87
HCG18-234ENST00000413358 PPEF2O14830 753 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 NCK2O43639 380 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 DGKIO75912 1065 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 ASS1P00966 412 aaKnown RBP9.6□□□□□ -0.87
HCG18-234ENST00000413358 UCHL3P15374 230 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 TBXAS1P24557 533 aaPredicted RBP9.6□□□□□ -0.87
HCG18-234ENST00000413358 RPL9P32969 192 aaKnown RBP9.6□□□□□ -0.87
HCG18-234ENST00000413358 CLCNKBP51801 687 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 POLR2FP61218 127 aaKnown RBP9.6□□□□□ -0.87
HCG18-234ENST00000413358 CCDC173Q0VFZ6 552 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 KCNMA1Q12791 1236 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 GPM6BQ13491 265 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 BTG3Q14201 252 aaPredicted RBP9.6□□□□□ -0.87
HCG18-234ENST00000413358 NAB2Q15742 525 aa9.6□□□□□ -0.87
HCG18-234ENST00000413358 KLHDC7AQ5VTJ3 777 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms