RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 TUFT1Q9NNX1 390 aa10.42□□□□□ -0.74
SOX9-AS1-201ENST00000412640 VPS45Q9NRW7 570 aa10.42□□□□□ -0.74
SOX9-AS1-201ENST00000412640 RBM12Q9NTZ6 932 aaKnown RBP10.42□□□□□ -0.74
SOX9-AS1-201ENST00000412640 RWDD2AQ9UIY3 292 aa10.42□□□□□ -0.74
SOX9-AS1-201ENST00000412640 PRG3Q9Y2Y8 225 aaPredicted RBP10.42□□□□□ -0.74
SOX9-AS1-201ENST00000412640 COL1A2P08123 1366 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 MYMKA6NI61 221 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 GOLGA6L6A8MZA4 724 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 CCL16O15467 120 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 MED24O75448 989 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 SPATA31C1P0DKV0 1188 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 RPL17P18621 184 aaKnown RBP10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 ATP4AP20648 1035 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 PXNP49023 591 aaPredicted RBP10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 SLC26A2P50443 739 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 FANCCQ00597 558 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 PSMD2Q13200 908 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 GRM2Q14416 872 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 MCM6Q14566 821 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 LRCH2Q5VUJ6 765 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 TWF2Q6IBS0 349 aaKnown RBP10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 TANGO2Q6ICL3 276 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 FOXR2Q6PJQ5 311 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 CACNA2D4Q7Z3S7 1137 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 WDR5BQ86VZ2 330 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 ZSCAN30Q86W11 494 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 CATSPER3Q86XQ3 398 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 NPAS3Q8IXF0 933 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 DEFB124Q8NES8 71 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 MCRS1Q96EZ8 462 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 FAM193BQ96PV7 902 aaPredicted RBP10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 PLIN2Q99541 437 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 BRD9Q9H8M2 597 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 JADE2Q9NQC1 790 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 FANCLQ9NW38 375 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 HCFC1R1Q9NWW0 138 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 MARCH5Q9NX47 278 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 NFE2L3Q9Y4A8 694 aa10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 MTCL1Q9Y4B5 1905 aaKnown RBP10.41□□□□□ -0.74
SOX9-AS1-201ENST00000412640 F8W810 466 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 DDX39AO00148 427 aaKnown RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 IPO5O00410 1097 aaKnown RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 MAFGO15525 162 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 CBFA2T2O43439 604 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 ECI2O75521 394 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 RPP40O75818 363 aaKnown RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 ATG7O95352 703 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 PLA2G2AP14555 144 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 DARSP14868 501 aaKnown RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 CSRP1P21291 193 aaKnown RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 PRCPP42785 496 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 SLC12A3P55017 1021 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 DSG1Q02413 1049 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 PAK1Q13153 545 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 EPHA7Q15375 998 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 CDKAL1Q5VV42 579 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 EFCAB12Q6NXP0 572 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 POTEHQ6S545 545 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 Q6ZS52 159 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 CCDC60Q8IWA6 550 aaPredicted RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 LRRC71Q8N4P6 559 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 URGCPQ8TCY9 931 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 GAB3Q8WWW8 586 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 DNASE1L2Q92874 299 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 DNAJC19Q96DA6 116 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 DHTKD1Q96HY7 919 aaPredicted RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 SCLT1Q96NL6 688 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 HNRNPABQ99729 332 aaKnown RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 EIF2AK1Q9BQI3 630 aaKnown RBP10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 ZNF577Q9BSK1 485 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 KCNH7Q9NS40 1196 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 PCDHGA5Q9Y5G8 931 aa10.4□□□□□ -0.74
SOX9-AS1-201ENST00000412640 IGKV6D-21A0A0A0MT36 114 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 FRMD3A2A2Y4 597 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 ESPNB1AK53 854 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 EML1O00423 815 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 DHX15O43143 795 aaKnown RBP10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 GAS7O60861 476 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 C1QL1O75973 258 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 PAPSS2O95340 614 aaPredicted RBP10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 CCNE2O96020 404 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 POMCP01189 267 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 PTMAP06454 111 aaKnown RBP10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 PLA2G4BP0C869 781 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 ATP1A3P13637 1013 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 CCNE1P24864 410 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 OR1G1P47890 313 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 ASIC1P78348 528 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 SCAPQ12770 1279 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 ITGB3BPQ13352 177 aaPredicted RBP10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 STIM1Q13586 685 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 UAP1L1Q3KQV9 507 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 PPM1LQ5SGD2 360 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 FAM160B1Q5W0V3 765 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 NCAPH2Q6IBW4 605 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 SWSAP1Q6NVH7 229 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 AGMOQ6ZNB7 445 aa10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 RNF168Q8IYW5 571 aaPredicted RBP10.39□□□□□ -0.75
SOX9-AS1-201ENST00000412640 SYT2Q8N9I0 419 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms