RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CDT1Q9H211 546 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 CLCA2Q9UQC9 943 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 HDAC5Q9UQL6 1122 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP15Q9Y4E8 981 aaPredicted RBP-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 BACE2Q9Y5Z0 518 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 CHD8Q9HCK8 2581 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 BRWD3Q6RI45 1802 aa-0.97□□□□□ -2.56
RNU4-88P-201ENST00000411220 MALRD1Q5VYJ5 2156 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 CACNA1CQ13936 2221 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 MUC21A0A0G2JKD1 596 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 IGLV5-39A0A0G2JS06 123 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 MUC21A0A140T8X8 626 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 A0A1W2PQM1 296 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 C2orf78A6NCI8 922 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 SHOXO15266 292 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 KIF1CO43896 1103 aaKnown RBP-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 KRT6AP02538 564 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 KRT6BP04259 564 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 KIR2DS4P43632 304 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 GJA8P48165 433 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 KRT6CP48668 564 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF445P59923 1031 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 KRTAP12-1P59990 96 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 RPL11P62913 178 aaKnown RBP-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 MTMR3Q13615 1198 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 IQCCQ4KMZ1 466 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 WASHC2DQ5SRD0 308 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 MUC21Q5SSG8 566 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 C9orf57Q5W0N0 161 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 EGFLAMQ63HQ2 1017 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 CEP85Q6P2H3 762 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 B4GALNT4Q76KP1 1039 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 TAS1R1Q7RTX1 841 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 CMTM4Q8IZR5 234 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 NKAPQ8N5F7 415 aaKnown RBP-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 NACC2Q96BF6 587 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 TMEM169Q96HH4 297 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 BOD1Q96IK1 185 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 NLRP4Q96MN2 994 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZDHHC15Q96MV8 337 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 UCN2Q96RP3 112 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 MCMBPQ9BTE3 642 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 BCO2Q9BYV7 579 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 GLIS2Q9BZE0 524 aaPredicted RBP-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 MTFR1LQ9H019 292 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 EPC1Q9H2F5 836 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF696Q9H7X3 374 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 SCAF8Q9UPN6 1271 aaKnown RBP-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 FHOD1Q9Y613 1164 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 GAKO14976 1311 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 ATRNL1Q5VV63 1379 aa-0.98□□□□□ -2.57
RNU4-88P-201ENST00000411220 FLNBO75369 2602 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 MYO16Q9Y6X6 1858 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 WNK2Q9Y3S1 2297 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 IGKV1-8A0A0C4DH67 115 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 SRRM4A7MD48 611 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 FOXN3O00409 490 aaPredicted RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 SPTLC2O15270 562 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNF324O75467 553 aaPredicted RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 JUNP05412 331 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 RARBP10826 455 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 GATA2P23769 480 aaPredicted RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 POLR2BP30876 1174 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 CRISP1P54107 249 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 CD83Q01151 205 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 ORC1Q13415 861 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 MOGSQ13724 837 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 KIF22Q14807 665 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 ARSHQ5FYA8 562 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 B3GNTL1Q67FW5 361 aaPredicted RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 GRAMD4Q6IC98 578 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 NXPE4Q6UWF7 544 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 NLRP10Q86W26 655 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 MAPKAPK5Q8IW41 473 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 PNLDC1Q8NA58 520 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 FAM200AQ8TCP9 573 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 HELQQ8TDG4 1101 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 EPS8L3Q8TE67 593 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 GFM2Q969S9 779 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 RUNDC1Q96C34 613 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 FBXL20Q96IG2 436 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 WNK4Q96J92 1243 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 ASB2Q96Q27 587 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 MMP19Q99542 508 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 KLF6Q99612 283 aaPredicted RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 ACO2Q99798 780 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 LSM14BQ9BX40 385 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 GDPD2Q9HCC8 539 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZCCHC3Q9NUD5 404 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 DDX43Q9NXZ2 648 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 ZNRF3Q9ULT6 936 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 KMT2EQ8IZD2 1858 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 HECTD4Q9Y4D8 3996 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 JMJD1CQ15652 2540 aa-0.99□□□□□ -2.57
RNU4-88P-201ENST00000411220 C17orf102A2RUQ5 167 aa-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms