RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 BIRC2Q13490 618 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SAFB2Q14151 953 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LRRC41Q15345 812 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RNF151Q2KHN1 245 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ANO6Q4KMQ2 910 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 STRIP1Q5VSL9 837 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 EPM2AIP1Q7L775 607 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 C14orf80Q86SX3 495 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CLEC14AQ86T13 490 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CMTM4Q8IZR5 234 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PQLC1Q8N2U9 271 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 OR5M3Q8NGP4 307 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MORC4Q8TE76 937 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RABGGTAQ92696 567 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DDX17Q92841 729 aaKnown RBP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RUNDC1Q96C34 613 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 IL17RAQ96F46 866 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TAAR9Q96RI9 348 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SARGQ9BW04 601 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KRTAP1-5Q9BYS1 174 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GTPBP4Q9BZE4 634 aaKnown RBP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LRRC27Q9C0I9 530 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NUP62CLQ9H1M0 184 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MYH16Q9H6N6 1097 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SIDT1Q9NXL6 827 aaKnown RBP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NCDNQ9UBB6 729 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 USP25Q9UHP3 1055 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SCOCQ9UIL1 159 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TUBD1Q9UJT1 453 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CTDP1Q9Y5B0 961 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NUP153P49790 1475 aaKnown RBP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NLRP1Q9C000 1473 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KDM5CP41229 1560 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZNF335Q9H4Z2 1342 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FAM135BQ49AJ0 1406 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KIAA1107Q9UPP5 1409 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KDM5DQ9BY66 1539 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HECW1Q76N89 1606 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RAPGEF6Q8TEU7 1601 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RICTORQ6R327 1708 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 A0A1W2PPL8 197 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 A0A1W2PRX2 142 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PJA2O43164 708 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PHGDHO43175 533 aaKnown RBP3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FRS3O43559 492 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MFAP3LO75121 409 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TOX4O94842 621 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ANXA1P04083 346 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GNAT2P19087 354 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PTPN7P35236 360 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GZMKP49863 264 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CD69Q07108 199 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 UBE4AQ14139 1066 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FGL2Q14314 439 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HABP2Q14520 560 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ODF1Q14990 250 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 POLD3Q15054 466 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RAVER1Q8IY67 606 aaKnown RBP3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FAM43AQ8N2R8 423 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PRR18Q8N4B5 295 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZFP28Q8NHY6 868 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 IPCEF1Q8WWN9 437 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TMX3Q96JJ7 454 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZC3H10Q96K80 434 aaKnown RBP3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CLPTM1LQ96KA5 538 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SLC2A13Q96QE2 648 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MPHOSPH9Q99550 1183 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TCF25Q9BQ70 676 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 POLR3GLQ9BT43 218 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SLC12A5Q9H2X9 1139 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ARNT2Q9HBZ2 717 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LMBRD1Q9NUN5 540 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RLIMQ9NVW2 624 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GABBR1Q9UBS5 961 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 A2ML1A8K2U0 1454 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SHANK2Q9UPX8 1470 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MED1Q15648 1581 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FER1L4A9Z1Z3 1794 aa3.2□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SPAG9O60271 1321 aaKnown RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SPATA31A6Q5VVP1 1343 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CAMSAP1Q5T5Y3 1602 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PRR5-ARHGAP8B1AHC4 643 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ADCY6O43306 1168 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SLC26A4O43511 780 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 B3GALT2O43825 422 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TMEM127O75204 238 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PPFIA4O75335 1185 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ITGA10O75578 1167 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TUSC2O75896 110 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 UBXN7O94888 489 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RAP2AP10114 183 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HNRNPLP14866 589 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ATP5JP18859 108 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HTR1BP28222 390 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ADSLP30566 484 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FXR1P51114 621 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 APBA1Q02410 837 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DUSP8Q13202 625 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NOGQ13253 232 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms