RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PON1P27169 355 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 PIK3CAP42336 1068 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 UBXN1Q04323 297 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 TIGD5Q53EQ6 642 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 DPH6Q7L8W6 267 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 RABGGTAQ92696 567 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 SUSD3Q96L08 255 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 IFNKQ9P0W0 207 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 SIK3Q9Y2K2 1263 aa16.36■□□□□ 0.21
LSM5-207ENST00000410044 NT5C1B-RDH14C9J2C7 533 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 CBFA2T2O43439 604 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 TRAPPC3O43617 180 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 TADA2AO75478 443 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 ITGB1P05556 798 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 SLC9A1P19634 815 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 PBX1P40424 430 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 ELAVL2Q12926 359 aaKnown RBP16.35■□□□□ 0.21
LSM5-207ENST00000410044 WDR44Q5JSH3 913 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 TRIM65Q6PJ69 517 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 TMEM173Q86WV6 379 aaPredicted RBP16.35■□□□□ 0.21
LSM5-207ENST00000410044 CCDC150Q8NCX0 1101 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 TGS1Q96RS0 853 aaKnown RBP16.35■□□□□ 0.21
LSM5-207ENST00000410044 IMPG2Q9BZV3 1241 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 XPO4Q9C0E2 1151 aaKnown RBP16.35■□□□□ 0.21
LSM5-207ENST00000410044 INTS2Q9H0H0 1204 aaKnown RBP16.35■□□□□ 0.21
LSM5-207ENST00000410044 FAM124BQ9H5Z6 455 aaPredicted RBP16.35■□□□□ 0.21
LSM5-207ENST00000410044 PLCB1Q9NQ66 1216 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 PRG3Q9Y2Y8 225 aaPredicted RBP16.35■□□□□ 0.21
LSM5-207ENST00000410044 NUB1Q9Y5A7 615 aa16.35■□□□□ 0.21
LSM5-207ENST00000410044 F8W810 466 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 PES1O00541 588 aaKnown RBP16.34■□□□□ 0.21
LSM5-207ENST00000410044 CYP11A1P05108 521 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 PBX3P40426 434 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 NOP14P78316 857 aaKnown RBP16.34■□□□□ 0.21
LSM5-207ENST00000410044 ZNF699Q32M78 642 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 WDR72Q3MJ13 1102 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 ZNF667Q5HYK9 610 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 FUT10Q6P4F1 479 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 DDX53Q86TM3 631 aaKnown RBP16.34■□□□□ 0.21
LSM5-207ENST00000410044 GPR65Q8IYL9 337 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 SPATA18Q8TC71 538 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 BCL7CQ8WUZ0 217 aaPredicted RBP16.34■□□□□ 0.21
LSM5-207ENST00000410044 TATDN2Q93075 761 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 SENP8Q96LD8 212 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 FAM81BQ96LP2 452 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 PI4K2AQ9BTU6 479 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 GPR62Q9BZJ7 368 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 NKX2-4Q9H2Z4 354 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 APOBEC3GQ9HC16 384 aaKnown RBP16.34■□□□□ 0.21
LSM5-207ENST00000410044 SIX2Q9NPC8 291 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 FBXL5Q9UKA1 691 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 LZTS1Q9Y250 596 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 DAAM1Q9Y4D1 1078 aa16.34■□□□□ 0.21
LSM5-207ENST00000410044 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 SYN3O14994 580 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 FGF18O76093 207 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 TPM3P06753 285 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 P4HA1P13674 534 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 TYMPP19971 482 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 FGFR3P22607 806 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 DNAJB2P25686 324 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 BRCC3P46736 316 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 GCNT1Q02742 428 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 KRT17Q04695 432 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 UBE3AQ05086 875 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 SYCP1Q15431 976 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 SPOPLQ6IQ16 392 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 PHLDB3Q6NSJ2 640 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 TOP6BLQ8N6T0 577 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 KLHL23Q8NBE8 558 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 JAKMIP2Q96AA8 810 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 TIFAQ96CG3 184 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 TMEM169Q96HH4 297 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 NT5C1BQ96P26 610 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 C17orf80Q9BSJ5 609 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 BCO2Q9BYV7 579 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 SLC28A3Q9HAS3 691 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 CYP3A43Q9HB55 503 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 CHST7Q9NS84 486 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 SNX9Q9Y5X1 595 aa16.33■□□□□ 0.2
LSM5-207ENST00000410044 VWA8A3KMH1 1905 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 GOLGA6L3A6NEY3 463 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 CYB561D2O14569 222 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 TACC1O75410 805 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 SF3B1O75533 1304 aaKnown RBP eCLIP16.32■□□□□ 0.23e-7■■■■■ 27.3
LSM5-207ENST00000410044 CTNNB1P35222 781 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 MRPL58Q14197 206 aaKnown RBP16.32■□□□□ 0.2
LSM5-207ENST00000410044 SOWAHAQ2M3V2 549 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 KLHDC7AQ5VTJ3 777 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 DSTYKQ6XUX3 929 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
LSM5-207ENST00000410044 TMEM86AQ8N2M4 240 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 SPPL3Q8TCT6 385 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 VN1R3Q9BXE9 311 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 TRIM5Q9C035 493 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms