RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 DSC3Q14574 896 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 CLEC16AQ2KHT3 1053 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 FBXO47Q5MNV8 452 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 LRRC57Q8N9N7 239 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 ARRDC4Q8NCT1 418 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 RFFLQ8WZ73 363 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 KIF12Q96FN5 646 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 GLT1D1Q96MS3 346 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 ALS2CR12Q96Q35 445 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 CISHQ9NSE2 258 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 CDC23Q9UJX2 597 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 JRKLQ9Y4A0 524 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 PCDHB4Q9Y5E5 795 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 GRID2IPA4D2P6 1211 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 URI1O94763 535 aaPredicted RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 MTA2O94776 668 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 SLU7O95391 586 aaKnown RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 ATP1A1P05023 1023 aaKnown RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 PRLRP16471 622 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 CYP3A5P20815 502 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 RBP5P82980 135 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 INCA1Q0VD86 236 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 ZNF667Q5HYK9 610 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 TMEM270Q6UE05 265 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 TRIM72Q6ZMU5 477 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 MRPL10Q7Z7H8 261 aaKnown RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 SLFN11Q7Z7L1 901 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 TMEM130Q8N3G9 435 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 LRRC52Q8N7C0 313 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 TRIM6Q9C030 488 aaPredicted RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 SDCBP2Q9H190 292 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 CYP3A43Q9HB55 503 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 TRMT13Q9NUP7 481 aaKnown RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 UBQLN1Q9UMX0 589 aaKnown RBP5.9□□□□□ -1.46
EPHA4-202ENST00000409854 POLIQ9UNA4 740 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 ST3GAL5Q9UNP4 418 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 HES2Q9Y543 173 aa5.9□□□□□ -1.46
EPHA4-202ENST00000409854 SCN5AQ14524 2016 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 UQCRHLA0A096LP55 91 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 DNM1LO00429 736 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 GPR182O15218 404 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 UQCRHP07919 91 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 GNA15P30679 374 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 POLR2BP30876 1174 aaKnown RBP5.9□□□□□ -1.47
EPHA4-202ENST00000409854 THPOP40225 353 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 CDK7P50613 346 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 CENPCQ03188 943 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 LPIN1Q14693 890 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 IFI16Q16666 785 aaKnown RBP5.9□□□□□ -1.47
EPHA4-202ENST00000409854 ACAD10Q6JQN1 1059 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 DNAAF5Q86Y56 855 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 USP38Q8NB14 1042 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 BEST2Q8NFU1 509 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 TPCN2Q8NHX9 752 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 AGO3Q9H9G7 860 aaKnown RBP5.9□□□□□ -1.47
EPHA4-202ENST00000409854 WBP1LQ9NX94 342 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 TUBGCP4Q9UGJ1 667 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 PCDHGC3Q9UN70 934 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 LTBP2Q14767 1821 aa5.9□□□□□ -1.47
EPHA4-202ENST00000409854 PATJQ8NI35 1801 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 SMIM28A0A1B0GU29 152 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ARVCFO00192 962 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PIRO00625 290 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 BUB1O43683 1085 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF623O75123 536 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 FTLP02792 175 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CYP1A2P05177 515 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 KRT19P08727 400 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PAEPP09466 180 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CTSHP09668 335 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ATXN8OSP0DMR3 200 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CDH5P33151 784 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 GUCY2FP51841 1108 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 MEI1Q5TIA1 1274 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PPP1R2P3Q6NXS1 205 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 LIMS2Q7Z4I7 341 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 EGFL6Q8IUX8 553 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 RHOT2Q8IXI1 618 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 TTC39CQ8N584 583 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 SH3TC2Q8TF17 1288 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 WHAMMQ8TF30 809 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CTNNBL1Q8WYA6 563 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ARHGEF26Q96DR7 871 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 HPDLQ96IR7 371 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 OSBPL7Q9BZF2 842 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 THAP2Q9H0W7 228 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 UNC93B1Q9H1C4 597 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 RNF39Q9H2S5 420 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ABCB6Q9NP58 842 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 FAM105AQ9NUU6 356 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 TSKSQ9UJT2 592 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 OGDHLQ9ULD0 1010 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 SNX12Q9UMY4 172 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 AGAP1Q9UPQ3 857 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 MICAL3Q7RTP6 2002 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 KBTBD13C9JR72 458 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PTGESO14684 152 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 XPOTO43592 962 aaKnown RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CILPO75339 1184 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PALMO75781 387 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms