RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 SLC20A1Q8WUM9 679 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GATA6Q92908 595 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ARHGEF2Q92974 986 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 KLHL29Q96CT2 875 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 SPDL1Q96EA4 605 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 SAAL1Q96ER3 474 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 THOC1Q96FV9 657 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 BICD1Q96G01 975 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 TRIM7Q9C029 511 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 DCLK3Q9C098 648 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 CENPHQ9H3R5 247 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PSTPIP2Q9H939 334 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 KCNQ5Q9NR82 932 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ETAA1Q9NY74 926 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 SENP1Q9P0U3 644 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 NYAP2Q9P242 653 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 BCCIPQ9P287 314 aaKnown RBP eCLIP3.35□□□□□ -1.87
CUL3-204ENST00000409777 WDR35Q9P2L0 1181 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 DBR1Q9UK59 544 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 ZMYND8Q9ULU4 1186 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 TRIM33Q9UPN9 1127 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 USH1CQ9Y6N9 552 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 NUMBLQ9Y6R0 609 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 UMODL1Q5DID0 1318 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 DPPA5A6NC42 116 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 RSPH10B2B2RC85 870 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 FAM86B1E9PN63 330 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 FOXN3O00409 490 aaPredicted RBP3.34□□□□□ -1.87
CUL3-204ENST00000409777 NRG2O14511 850 aaPredicted RBP3.34□□□□□ -1.87
CUL3-204ENST00000409777 MSH4O15457 936 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 CDH16O75309 829 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 RPS6KA4O75676 772 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 RTN3O95197 1032 aaPredicted RBP3.34□□□□□ -1.87
CUL3-204ENST00000409777 LYPLA2O95372 231 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 ECEL1O95672 775 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 GH1P01241 217 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 SSBP05455 408 aaKnown RBP eCLIP3.34□□□□□ -1.87
CUL3-204ENST00000409777 GSTA2P09210 222 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 FAM86B2P0C5J1 330 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 RSPH10BP0C881 870 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 AKR1B1P15121 316 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 TSHRP16473 764 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 STAT3P40763 770 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 TUBP50607 506 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 EVA1CP58658 441 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 RPL26P61254 145 aaKnown RBP3.34□□□□□ -1.87
CUL3-204ENST00000409777 IGBP1P78318 339 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 LACTBP83111 547 aaPredicted RBP3.34□□□□□ -1.87
CUL3-204ENST00000409777 MYL7Q01449 175 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 CREB5Q02930 508 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 BFSP1Q12934 665 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 HNRNPDQ14103 355 aaKnown RBP3.34□□□□□ -1.87
CUL3-204ENST00000409777 NAA25Q14CX7 972 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 ARHGEF18Q6ZSZ5 1173 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 CEP128Q6ZU80 1094 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 SH2D5Q6ZV89 423 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 SH3BP5LQ7L8J4 393 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 MAPKAPK5Q8IW41 473 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 ARHGEF19Q8IW93 802 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 DAW1Q8N136 415 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 MAIP1Q8WWC4 291 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 GJA10Q969M2 543 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 TBC1D31Q96DN5 1066 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 GMCL1Q96IK5 515 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 TGS1Q96RS0 853 aaKnown RBP3.34□□□□□ -1.87
CUL3-204ENST00000409777 MIPEPQ99797 713 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 SELENOSQ9BQE4 189 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 HERPUD2Q9BSE4 406 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 TGIF2Q9GZN2 237 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 UBA5Q9GZZ9 404 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 BCAS3Q9H6U6 928 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 KIF9Q9HAQ2 790 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 ARHGEF4Q9NR80 690 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 SPATS2LQ9NUQ6 558 aaKnown RBP3.34□□□□□ -1.87
CUL3-204ENST00000409777 TBC1D7Q9P0N9 293 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 DNAJB4Q9UDY4 337 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 POLIQ9UNA4 740 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 STX8Q9UNK0 236 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 DNM3Q9UQ16 869 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 NAALADL1Q9UQQ1 740 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 DAGLAQ9Y4D2 1042 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 TANC1Q9C0D5 1861 aa3.34□□□□□ -1.87
CUL3-204ENST00000409777 FER1L6Q2WGJ9 1857 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 FAM47DPA6NHR8 397 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 TREHO43280 583 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 LRRN2O75325 713 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 DCTN3O75935 186 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 SLITRK3O94933 977 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 TGDSO95455 350 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 IGHA2P01877 340 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 FTLP02792 175 aaPredicted RBP3.34□□□□□ -1.88
CUL3-204ENST00000409777 FGFR1P11362 822 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 UNGP13051 313 aaPredicted RBP3.34□□□□□ -1.88
CUL3-204ENST00000409777 SP100P23497 879 aaPredicted RBP3.34□□□□□ -1.88
CUL3-204ENST00000409777 PTPN4P29074 926 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 HOXA10P31260 410 aaPredicted RBP3.34□□□□□ -1.88
CUL3-204ENST00000409777 SLC1A1P43005 524 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 PSMC4P43686 418 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 DNA2P51530 1060 aa3.34□□□□□ -1.88
CUL3-204ENST00000409777 GPC3P51654 580 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms