RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 KRT17Q04695 432 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 UBE3AQ05086 875 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 SGSM1Q2NKQ1 1148 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 DDX53Q86TM3 631 aaKnown RBP17.88■□□□□ 0.45
SUMO1-208ENST00000409627 SUSD3Q96L08 255 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 IMPG2Q9BZV3 1241 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 XYLT2Q9H1B5 865 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 VPS16Q9H269 839 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 RAB20Q9NX57 234 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 GDAP2Q9NXN4 497 aa17.88■□□□□ 0.45
SUMO1-208ENST00000409627 KPNA7A9QM74 516 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 H3BNC9 293 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 M0QZQ0 153 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 SPTLC1O15269 473 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 ASS1P00966 412 aaKnown RBP17.87■□□□□ 0.45
SUMO1-208ENST00000409627 BRCC3P46736 316 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 ZNF699Q32M78 642 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 TIGD5Q53EQ6 642 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 CCDC150Q8NCX0 1101 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 ARNTL2Q8WYA1 636 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 SEMA4DQ92854 862 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 HERC2P3Q9BVR0 1158 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 VN1R3Q9BXE9 311 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 GPR62Q9BZJ7 368 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 RBSNQ9H1K0 784 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 ZNF576Q9H609 170 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 CERS4Q9HA82 394 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 ATG2AQ2TAZ0 1938 aa17.87■□□□□ 0.45
SUMO1-208ENST00000409627 ARHGEF37A1IGU5 675 aa17.86■□□□□ 0.45
SUMO1-208ENST00000409627 LGALS16A8MUM7 142 aa17.86■□□□□ 0.45
SUMO1-208ENST00000409627 PES1O00541 588 aaKnown RBP17.86■□□□□ 0.45
SUMO1-208ENST00000409627 SOD2P04179 222 aa17.86■□□□□ 0.45
SUMO1-208ENST00000409627 GPM6BQ13491 265 aa17.86■□□□□ 0.45
SUMO1-208ENST00000409627 HABP4Q5JVS0 413 aaKnown RBP17.86■□□□□ 0.45
SUMO1-208ENST00000409627 DSTYKQ6XUX3 929 aa17.86■□□□□ 0.45
SUMO1-208ENST00000409627 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.86■□□□□ 0.45
SUMO1-208ENST00000409627 GBP6Q6ZN66 633 aa17.86■□□□□ 0.45
SUMO1-208ENST00000409627 LMO3Q8TAP4 145 aa17.86■□□□□ 0.45
SUMO1-208ENST00000409627 SPPL3Q8TCT6 385 aa17.86■□□□□ 0.45
SUMO1-208ENST00000409627 PUF60Q9UHX1 559 aaKnown RBP17.86■□□□□ 0.45
SUMO1-208ENST00000409627 LAMA2P24043 3122 aaKnown RBP17.85■□□□□ 0.45
SUMO1-208ENST00000409627 I3L4J1 428 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 SYN3O14994 580 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 SERPINC1P01008 464 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 ODC1P11926 461 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 FGFR3P22607 806 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 NOP14P78316 857 aaKnown RBP17.85■□□□□ 0.45
SUMO1-208ENST00000409627 FANCCQ00597 558 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 CHD9Q3L8U1 2897 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 WDR72Q3MJ13 1102 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 ZNF667Q5HYK9 610 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 WDR44Q5JSH3 913 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 FKBP15Q5T1M5 1219 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 FAM171A1Q5VUB5 890 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 EHBP1Q8NDI1 1231 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 POF1BQ8WVV4 589 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 LRCH3Q96II8 777 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 FAXDC2Q96IV6 333 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 SENP8Q96LD8 212 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 PI4K2AQ9BTU6 479 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 LMAN2LQ9H0V9 348 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 ALG13Q9NP73 1137 aaKnown RBP17.85■□□□□ 0.45
SUMO1-208ENST00000409627 GCNT4Q9P109 453 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 PCDHB8Q9UN66 801 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 SNX9Q9Y5X1 595 aa17.85■□□□□ 0.45
SUMO1-208ENST00000409627 A0A1B0GTH6 734 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 EPOPA6NHQ4 379 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 CYB561D2O14569 222 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 GRM6O15303 877 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 LRRN2O75325 713 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 CYP11A1P05108 521 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 P4HA1P13674 534 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 TYMPP19971 482 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 TNNC1P63316 161 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 EXOC3L4Q17RC7 722 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 USP41Q3LFD5 358 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 FILIP1LQ4L180 1135 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 ZNF697Q5TEC3 545 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 GPR153Q6NV75 609 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 DPH6Q7L8W6 267 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 LIMS2Q7Z4I7 341 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 GPR65Q8IYL9 337 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 TOP6BLQ8N6T0 577 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 INTS2Q9H0H0 1204 aaKnown RBP17.84■□□□□ 0.45
SUMO1-208ENST00000409627 ZBP1Q9H171 429 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 TTYH1Q9H313 450 aaPredicted RBP17.84■□□□□ 0.45
SUMO1-208ENST00000409627 APOBEC3GQ9HC16 384 aaKnown RBP17.84■□□□□ 0.45
SUMO1-208ENST00000409627 CHST7Q9NS84 486 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 DSEQ9UL01 958 aa17.84■□□□□ 0.45
SUMO1-208ENST00000409627 HUS1O60921 280 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 CLSTN1O94985 981 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 CTSAP10619 480 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 DNAJB1P25685 340 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 TKTP29401 623 aaKnown RBP17.83■□□□□ 0.44
SUMO1-208ENST00000409627 GLUD2P49448 558 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 DSG1Q02413 1049 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 SPOPLQ6IQ16 392 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 TRIM65Q6PJ69 517 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 TAS1R1Q7RTX1 841 aa17.83■□□□□ 0.44
SUMO1-208ENST00000409627 VPS52Q8N1B4 723 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms