RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NT5DC4Q86YG4 428 aa16.78■□□□□ 0.28
SHANK2-204ENST00000409530 GLYCTKQ8IVS8 523 aa16.78■□□□□ 0.28
SHANK2-204ENST00000409530 C16orf45Q96MC5 204 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-204ENST00000409530 PPP1R10Q96QC0 940 aaKnown RBP16.78■□□□□ 0.28
SHANK2-204ENST00000409530 TSPYL2Q9H2G4 693 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-204ENST00000409530 HMGXB4Q9UGU5 601 aa16.78■□□□□ 0.28
SHANK2-204ENST00000409530 DERAQ9Y315 318 aa16.78■□□□□ 0.28
SHANK2-204ENST00000409530 ALPK3Q96L96 1907 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 XPOTO43592 962 aaKnown RBP16.77■□□□□ 0.28
SHANK2-204ENST00000409530 CCDC175P0C221 793 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 ACRP10323 421 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 KCNE1P15382 129 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 CSF2RAP15509 400 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 TBXAS1P24557 533 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-204ENST00000409530 CLCN1P35523 988 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 PDE6CP51160 858 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 CLCNKBP51801 687 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 POU5F1Q01860 360 aaKnown RBP16.77■□□□□ 0.28
SHANK2-204ENST00000409530 MYO1EQ12965 1108 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 ZBTB6Q15916 424 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 C1orf53Q5VUE5 145 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 TMCO2Q7Z6W1 182 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-204ENST00000409530 CCAR2Q8N163 923 aaKnown RBP16.77■□□□□ 0.28
SHANK2-204ENST00000409530 RBBP8NLQ8NC74 664 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-204ENST00000409530 SYN2Q92777 582 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-204ENST00000409530 PPP1R13BQ96KQ4 1090 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 FTHL17Q9BXU8 183 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 SDCBP2Q9H190 292 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 CISHQ9NSE2 258 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 LRFN2Q9ULH4 789 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 GIT1Q9Y2X7 761 aa16.77■□□□□ 0.28
SHANK2-204ENST00000409530 A0A087X0T9 212 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 ZNF263O14978 683 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 FAM228BP0C875 321 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 CLLU1OSQ5K130 101 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 FAM117BQ6P1L5 589 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 MRPL10Q7Z7H8 261 aaKnown RBP16.76■□□□□ 0.27
SHANK2-204ENST00000409530 KIAA1328Q86T90 577 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 NOP9Q86U38 636 aaKnown RBP16.76■□□□□ 0.27
SHANK2-204ENST00000409530 HCSTQ9UBK5 93 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 TRIM10Q9UDY6 481 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 MYO6Q9UM54 1294 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 REXO2Q9Y3B8 237 aaKnown RBP16.76■□□□□ 0.27
SHANK2-204ENST00000409530 ADGRG1Q9Y653 693 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 MICAL3Q7RTP6 2002 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 F8W810 466 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 SPA17Q15506 151 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 ZNF598Q86UK7 904 aaKnown RBP16.76■□□□□ 0.27
SHANK2-204ENST00000409530 PALB2Q86YC2 1186 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 FAM71AQ8IYT1 594 aa16.76■□□□□ 0.27
SHANK2-204ENST00000409530 RPUSD2Q8IZ73 545 aaKnown RBP16.76■□□□□ 0.27
SHANK2-204ENST00000409530 I3L4J1 428 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 ENPP3O14638 875 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 SPTLC1O15269 473 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 HCRTO43612 131 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 ZNF623O75123 536 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 ABL1P00519 1130 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 MMEP08473 750 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 SKIP12755 728 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 ACO1P21399 889 aaKnown RBP16.75■□□□□ 0.27
SHANK2-204ENST00000409530 RNASELQ05823 741 aaKnown RBP16.75■□□□□ 0.27
SHANK2-204ENST00000409530 XKR4Q5GH76 650 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.75■□□□□ 0.275e-9■■■□□ 18.5
SHANK2-204ENST00000409530 ENOSF1Q7L5Y1 443 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 PASD1Q8IV76 773 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 C7orf61Q8IZ16 206 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 ABI1Q8IZP0 508 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 LNX1Q8TBB1 728 aaPredicted RBP16.75■□□□□ 0.27
SHANK2-204ENST00000409530 EPS8L1Q8TE68 723 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 PCDHB7Q9Y5E2 793 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 CYP11B1P15538 503 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 C3orf58Q8NDZ4 430 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 ZNF560Q96MR9 790 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 TRAIPQ9BWF2 469 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 RRAGDQ9NQL2 400 aaPredicted RBP16.75■□□□□ 0.27
SHANK2-204ENST00000409530 SLC38A7Q9NVC3 462 aa16.75■□□□□ 0.27
SHANK2-204ENST00000409530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.74■□□□□ 0.27
SHANK2-204ENST00000409530 PODXLO00592 558 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 B4GALT3O60512 393 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 CCDC172P0C7W6 258 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 P4HA1P13674 534 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 CD19P15391 556 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 SYN1P17600 705 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 GNA15P30679 374 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 ATICP31939 592 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 CDK17Q00537 523 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 VPS36Q86VN1 386 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 CCDC170Q8IYT3 715 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 APBB2Q92870 758 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 TWNKQ96RR1 684 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 PACSIN1Q9BY11 444 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 PDCL3Q9H2J4 239 aa16.74■□□□□ 0.27
SHANK2-204ENST00000409530 THAP12O43422 761 aa16.73■□□□□ 0.27
SHANK2-204ENST00000409530 TNFAIP3P21580 790 aa16.73■□□□□ 0.27
SHANK2-204ENST00000409530 BRD2P25440 801 aaKnown RBP16.73■□□□□ 0.27
SHANK2-204ENST00000409530 PRKCIP41743 596 aa16.73■□□□□ 0.27
SHANK2-204ENST00000409530 TAF6P49848 677 aa16.73■□□□□ 0.27
SHANK2-204ENST00000409530 NAB2Q15742 525 aa16.73■□□□□ 0.27
SHANK2-204ENST00000409530 ZNF280BQ86YH2 543 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms