RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 POLR2BP30876 1174 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 PNPLA4P41247 253 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 TAF6P49848 677 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 CLDN10P78369 228 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 RBP5P82980 135 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 VARS2Q5ST30 1063 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 PARD3BQ8TEW8 1205 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 MSLNLQ96KJ4 702 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 ZNF560Q96MR9 790 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 ASB2Q96Q27 587 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 TSG101Q99816 390 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 NUP62CLQ9H1M0 184 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 SIX4Q9UIU6 781 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 AGAP1Q9UPQ3 857 aa21.42■■□□□ 1.02
PDLIM2-207ENST00000409417 PPP1R3GB7ZBB8 358 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 CD44P16070 742 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 EPCAMP16422 314 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 LRRC63Q05C16 580 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 MRPL58Q14197 206 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 ANKRD40Q6AI12 368 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 DSTYKQ6XUX3 929 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 LRRC52Q8N7C0 313 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 GPT2Q8TD30 523 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 PLEKHO2Q8TD55 490 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 TMC2Q8TDI7 906 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 SENP8Q96LD8 212 aa21.41■■□□□ 1.02
PDLIM2-207ENST00000409417 H7C4K7 107 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 GLUD1P00367 558 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 HOXB8P17481 243 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 CCNE1P24864 410 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 PSMC2P35998 433 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 PMS1P54277 932 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 SV2CQ496J9 727 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 ANKRD54Q6NXT1 300 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 TRAPPC11Q7Z392 1133 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 USP37Q86T82 979 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 BORCS6Q96GS4 357 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 CD207Q9UJ71 328 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 R3HCC1Q9Y3T6 440 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 VWA8A3KMH1 1905 aa21.4■■□□□ 1.02
PDLIM2-207ENST00000409417 ARHGEF37A1IGU5 675 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 KPNA7A9QM74 516 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 CETN3O15182 167 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 TBC1D4O60343 1298 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 OAZ2O95190 189 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 KRT19P08727 400 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 ODC1P11926 461 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 TYMPP19971 482 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 AP3M2P53677 418 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 FKBP3Q00688 224 aaKnown RBP21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 PUS10Q3MIT2 529 aaKnown RBP21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 LILRA6Q6PI73 481 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 INTS8Q75QN2 995 aaKnown RBP21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 PALB2Q86YC2 1186 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 GLYCTKQ8IVS8 523 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 ZC3H3Q8IXZ2 948 aaKnown RBP21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 FAM186BQ8IYM0 893 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 ZNF516Q92618 1163 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 MKNK1Q9BUB5 465 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 DZANK1Q9NVP4 752 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 DPP7Q9UHL4 492 aa21.39■■□□□ 1.02
PDLIM2-207ENST00000409417 SCN1AP35498 2009 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 LRRIQ3A6PVS8 624 aaPredicted RBP21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 IKBKBO14920 756 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 ADAM12O43184 909 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 TGM5O43548 720 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 OR1D2P34982 312 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 ENPEPQ07075 957 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 RAB33AQ14088 237 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 SCARA3Q6AZY7 606 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 SLC8B1Q6J4K2 584 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 KLHL10Q6JEL2 608 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 FOXR2Q6PJQ5 311 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 RSPO2Q6UXX9 243 aaPredicted RBP21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 SMRP1Q8NCR6 262 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 EEF2KMTQ96G04 330 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 DSEQ9UL01 958 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 TIMM13Q9Y5L4 95 aaPredicted RBP21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 CDY1Q9Y6F8 540 aa21.39■■□□□ 1.01
PDLIM2-207ENST00000409417 TTC28Q96AY4 2481 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 TRIM49BA6NDI0 452 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 CYB561D2O14569 222 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 MBD3O95983 291 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 KCNQ1P51787 676 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 MCCD1P59942 119 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 YWHAHQ04917 246 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 MYO1EQ12965 1108 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 CLUL1Q15846 466 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 CTXN3Q4LDR2 81 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 ZNF280DQ6N043 979 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 SYCE2Q6PIF2 218 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 ELMSAN1Q6PJG2 1045 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 HDAC7Q8WUI4 952 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 NELFBQ8WX92 580 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 HPDLQ96IR7 371 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 OXCT2Q9BYC2 517 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 PLEKHA4Q9H4M7 779 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 FBXL5Q9UKA1 691 aa21.38■■□□□ 1.01
PDLIM2-207ENST00000409417 VCANP13611 3396 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms