RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 IL23AQ9NPF7 189 aa18.06■□□□□ 0.48
SSB-202ENST00000409333 ZNHIT6Q9NWK9 470 aaKnown RBP18.06■□□□□ 0.48
SSB-202ENST00000409333 CCDC85CA6NKD9 419 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 EVI5O60447 810 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 B4GALT3O60512 393 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 PFKMP08237 780 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 SYN1P17600 705 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 ACO1P21399 889 aaKnown RBP18.05■□□□□ 0.48
SSB-202ENST00000409333 RAP1GAPP47736 663 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 MYO1EQ12965 1108 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 IRF2BP2Q7Z5L9 587 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 NPAS4Q8IUM7 802 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 RABGGTAQ92696 567 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 TBC1D13Q9NVG8 400 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 ARHGAP20Q9P2F6 1191 aa18.05■□□□□ 0.48
SSB-202ENST00000409333 ABHD14A-ACY1A0A1B0GW23 586 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 SPTLC1O15269 473 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 UPP2O95045 317 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 WEE2P0C1S8 567 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 USP8P40818 1118 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 TUSC3Q13454 348 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 MTF1Q14872 753 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 CYP26C1Q6V0L0 522 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 C16orf59Q7L2K0 433 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 UBR7Q8N806 425 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 C3orf58Q8NDZ4 430 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 URGCPQ8TCY9 931 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 ZNF560Q96MR9 790 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 CASD1Q96PB1 797 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 HTATIP2Q9BUP3 242 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 BCO2Q9BYV7 579 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 SDCBP2Q9H190 292 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 SMYD3Q9H7B4 428 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 PYCARDQ9ULZ3 195 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 PODXLO00592 558 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 DDHD2O94830 711 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 FERP16591 822 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 CD58P19256 250 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 TAF6P49848 677 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 CDH8P55286 799 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 TNNC1P63316 161 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 DEFB103AP81534 67 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 FPGSQ05932 587 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 UPP1Q16831 310 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 RAD9BQ6WBX8 426 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 ZNF280BQ86YH2 543 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 TMTC1Q8IUR5 882 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 FAM71AQ8IYT1 594 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 ABI1Q8IZP0 508 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 VWA8A3KMH1 1905 aa18.04■□□□□ 0.48
SSB-202ENST00000409333 CYP26A1O43174 497 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 SERPING1P05155 500 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 KRT5P13647 590 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 CLCN1P35523 988 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 LILRA4P59901 499 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 WDR5P61964 334 aaKnown RBP18.03■□□□□ 0.48
SSB-202ENST00000409333 CDK17Q00537 523 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 PPIGQ13427 754 aaKnown RBP eCLIP18.03■□□□□ 0.482e-8■□□□□ 9.4
SSB-202ENST00000409333 TDRD12Q587J7 1177 aaKnown RBP18.03■□□□□ 0.48
SSB-202ENST00000409333 OTOP2Q7RTS6 562 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 TMCO2Q7Z6W1 182 aaPredicted RBP18.03■□□□□ 0.48
SSB-202ENST00000409333 HAUS4Q9H6D7 363 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 ACP6Q9NPH0 428 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 CISHQ9NSE2 258 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.03■□□□□ 0.48
SSB-202ENST00000409333 ZMYND8Q9ULU4 1186 aaPredicted RBP18.03■□□□□ 0.48
SSB-202ENST00000409333 PCDHB4Q9Y5E5 795 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 SNX9Q9Y5X1 595 aa18.03■□□□□ 0.48
SSB-202ENST00000409333 MYH10P35580 1976 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 KPNA7A9QM74 516 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 ARHGAP6O43182 974 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 HOXA2O43364 376 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 NRDCO43847 1150 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 RPL9P32969 192 aaKnown RBP18.02■□□□□ 0.48
SSB-202ENST00000409333 PNPLA4P41247 253 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 PRKCIP41743 596 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 DSC1Q08554 894 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 KLHL30Q0D2K2 578 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 SV2CQ496J9 727 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 TMEM270Q6UE05 265 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 JAKMIP2Q96AA8 810 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 MMS19Q96T76 1030 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 NHEJ1Q9H9Q4 299 aaPredicted RBP18.02■□□□□ 0.48
SSB-202ENST00000409333 KANSL3Q9P2N6 904 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 HCSTQ9UBK5 93 aa18.02■□□□□ 0.48
SSB-202ENST00000409333 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.02■□□□□ 0.48
SSB-202ENST00000409333 TBKBP1A7MCY6 615 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 CALCAP01258 141 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 P4HA1P13674 534 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 EPHB4P54760 987 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 RNASELQ05823 741 aaKnown RBP18.02■□□□□ 0.47
SSB-202ENST00000409333 SLC47A2Q86VL8 602 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 TOP1MTQ969P6 601 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 FAXDC2Q96IV6 333 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.47
SSB-202ENST00000409333 DNAJB4Q9UDY4 337 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 ZKSCAN5Q9Y2L8 839 aa18.02■□□□□ 0.47
SSB-202ENST00000409333 GBF1Q92538 1859 aa18.01■□□□□ 0.47
SSB-202ENST00000409333 F8W810 466 aa18.01■□□□□ 0.47
SSB-202ENST00000409333 EFCAB14O75071 495 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms