RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 C4orf47A7E2U8 309 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 H7C4K7 107 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 ACKR2O00590 384 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 AKAP3O75969 853 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 LIG1P18858 919 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 PLK5Q496M5 336 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 EARS2Q5JPH6 523 aaKnown RBP14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 LRSAM1Q6UWE0 723 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 GPIHBP1Q8IV16 184 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 OXER1Q8TDS5 423 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 ZCCHC14Q8WYQ9 949 aaKnown RBP14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 MKNK1Q9BUB5 465 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 LRRC3Q9BY71 257 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 GPR88Q9GZN0 384 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 AFF4Q9UHB7 1163 aaKnown RBP14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 LHX6Q9UPM6 363 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 NUP205Q92621 2012 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 SMIM28A0A1B0GU29 152 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 LNP1A1A4G5 178 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 PODXLO00592 558 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 TNK2Q07912 1038 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 CTXN3Q4LDR2 81 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 BMP2KLQ5H9B9 411 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 SH3PXD2AQ5TCZ1 1133 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 ZNF280DQ6N043 979 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 ARID3BQ8IVW6 561 aaPredicted RBP14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 CEP120Q8N960 986 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 MCPH1Q8NEM0 835 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 NAP1L4Q99733 375 aaKnown RBP14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 SCNM1Q9BWG6 230 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 YIPF1Q9Y548 306 aa14.12□□□□□ -0.15
CHRNA1-203ENST00000409219 NBEAQ8NFP9 2946 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 CITO14578 2027 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 CPLX1O14810 134 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 BAG4O95429 457 aaKnown RBP14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 CPB1P15086 417 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 TOB2Q14106 344 aaPredicted RBP14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 ARHGAP29Q52LW3 1261 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 RNF19BQ6ZMZ0 732 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 DUSP15Q9H1R2 295 aaPredicted RBP14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 DNAJC25Q9H1X3 360 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 PCDHA12Q9UN75 941 aa14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 RBM19Q9Y4C8 960 aaKnown RBP14.11□□□□□ -0.15
CHRNA1-203ENST00000409219 VNN2O95498 520 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 ATP2B1P20020 1258 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 NAMPTP43490 491 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 XKR4Q5GH76 650 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 DAB2IPQ5VWQ8 1189 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 HAUS6Q7Z4H7 955 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 BEST2Q8NFU1 509 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 SUSD3Q96L08 255 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 ZMAT2Q96NC0 199 aaKnown RBP14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 KIFC3Q9BVG8 833 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 GJB4Q9NTQ9 266 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 POLR3BQ9NW08 1133 aaPredicted RBP14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 NUB1Q9Y5A7 615 aa14.1□□□□□ -0.15
CHRNA1-203ENST00000409219 PRAMEF12O95522 483 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 CAVIN2O95810 425 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 HSPA4P34932 840 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 NT5DC1Q5TFE4 455 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 ATF7IP2Q5U623 682 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 ALKAL1Q6UXT8 129 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 CHFRQ96EP1 664 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 HHIPQ96QV1 700 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 TMEM209Q96SK2 561 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 CRISPLD1Q9H336 500 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 TTC12Q9H892 705 aaPredicted RBP14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 SLC38A7Q9NVC3 462 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 MAFFQ9ULX9 164 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 SLC8A2Q9UPR5 921 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 KIAA1549LQ6ZVL6 1849 aa14.09□□□□□ -0.15
CHRNA1-203ENST00000409219 ASCC3Q8N3C0 2202 aaKnown RBP14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 BCLAF3A2AJT9 711 aaKnown RBP14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 DPYSL4O14531 572 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 SPATA31C1P0DKV0 1188 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 XRCC6P12956 609 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 CEACAM1P13688 526 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 CSRP1P21291 193 aaKnown RBP14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 GRM5P41594 1212 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 CREB5Q02930 508 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 ELF2Q15723 593 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 TMEM196Q5HYL7 178 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 FSTL4Q6MZW2 842 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 GAREM2Q75VX8 874 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 DEPTORQ8TB45 409 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 CDT1Q9H211 546 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 TOPORSQ9NS56 1045 aaPredicted RBP14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 OBP2AQ9NY56 170 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 MYO16Q9Y6X6 1858 aa14.08□□□□□ -0.16
CHRNA1-203ENST00000409219 CELSR3Q9NYQ7 3312 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 TAF4O00268 1085 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 DCLK1O15075 740 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 YARSP54577 528 aaKnown RBP14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 OSTNP61366 133 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 PLCB2Q00722 1185 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 STK3Q13188 491 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 CALCRLQ16602 461 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 ITPRIPL2Q3MIP1 535 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms