RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 FGBP02675 491 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 KCNJ6P48051 423 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 RNASELQ05823 741 aaKnown RBP21.96■■□□□ 1.11
CHKB-201ENST00000406938 DSC1Q08554 894 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 SFMBT2Q5VUG0 894 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 PSRC1Q6PGN9 363 aaPredicted RBP21.96■■□□□ 1.11
CHKB-201ENST00000406938 ZNF280BQ86YH2 543 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 SHC3Q92529 594 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 RABGGTAQ92696 567 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 TOP1MTQ969P6 601 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 PAAF1Q9BRP4 392 aa21.96■■□□□ 1.11
CHKB-201ENST00000406938 ZBBXA8MT70 800 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 DDHD2O94830 711 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 RPL9P32969 192 aaKnown RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 TAF6P49848 677 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 TNNC1P63316 161 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 UPP1Q16831 310 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 TMEM240Q5SV17 173 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 TMCO2Q7Z6W1 182 aaPredicted RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 RSPH1Q8WYR4 309 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 UROC1Q96N76 676 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.95■■□□□ 1.16e-7■■□□□ 13.4
CHKB-201ENST00000406938 MRPL9Q9BYD2 267 aaKnown RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 KCNF1Q9H3M0 494 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 FOXN3O00409 490 aaPredicted RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 SPTLC1O15269 473 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 DGKIO75912 1065 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 P4HA1P13674 534 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 HNRNPH3P31942 346 aaKnown RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 SOX5P35711 763 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 STAT1P42224 750 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 TSR1Q2NL82 804 aaKnown RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 SV2CQ496J9 727 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 C3orf58Q8NDZ4 430 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 SYN2Q92777 582 aaPredicted RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 FAXDC2Q96IV6 333 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 ZNF830Q96NB3 372 aaPredicted RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 LBHD1Q9BQE6 289 aaPredicted RBP21.95■■□□□ 1.1
CHKB-201ENST00000406938 BCO2Q9BYV7 579 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 SMYD3Q9H7B4 428 aa21.95■■□□□ 1.1
CHKB-201ENST00000406938 COL4A6Q14031 1691 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 SCN1AP35498 2009 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 GFPT2O94808 682 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 RAP1GAPP47736 663 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 LILRA4P59901 499 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 ARID5AQ03989 594 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 MEA1Q16626 185 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 PAN2Q504Q3 1202 aaKnown RBP21.94■■□□□ 1.1
CHKB-201ENST00000406938 FAM117BQ6P1L5 589 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 WDR59Q6PJI9 974 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 TMEM139Q8IV31 216 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 COLGALT2Q8IYK4 626 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 LRRC43Q8N309 656 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 JAKMIP2Q96AA8 810 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 DDX27Q96GQ7 796 aaKnown RBP21.94■■□□□ 1.1
CHKB-201ENST00000406938 FAM193BQ96PV7 902 aaPredicted RBP21.94■■□□□ 1.1
CHKB-201ENST00000406938 ZNHIT6Q9NWK9 470 aaKnown RBP21.94■■□□□ 1.1
CHKB-201ENST00000406938 AIPL1Q9NZN9 384 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 HCSTQ9UBK5 93 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 SNX9Q9Y5X1 595 aa21.94■■□□□ 1.1
CHKB-201ENST00000406938 KPNA7A9QM74 516 aa21.93■■□□□ 1.1
CHKB-201ENST00000406938 WEE2P0C1S8 567 aa21.93■■□□□ 1.1
CHKB-201ENST00000406938 ACO1P21399 889 aaKnown RBP21.93■■□□□ 1.1
CHKB-201ENST00000406938 FECHP22830 423 aa21.93■■□□□ 1.1
CHKB-201ENST00000406938 IGFBP6P24592 240 aaPredicted RBP21.93■■□□□ 1.1
CHKB-201ENST00000406938 ASIC2Q16515 512 aa21.93■■□□□ 1.1
CHKB-201ENST00000406938 UBR7Q8N806 425 aa21.93■■□□□ 1.1
CHKB-201ENST00000406938 MMS19Q96T76 1030 aa21.93■■□□□ 1.1
CHKB-201ENST00000406938 BAG1Q99933 345 aaPredicted RBP21.93■■□□□ 1.1
CHKB-201ENST00000406938 SDCBP2Q9H190 292 aa21.93■■□□□ 1.1
CHKB-201ENST00000406938 DNAJB4Q9UDY4 337 aa21.93■■□□□ 1.1
CHKB-201ENST00000406938 CD58P19256 250 aa21.92■■□□□ 1.1
CHKB-201ENST00000406938 USP8P40818 1118 aa21.92■■□□□ 1.1
CHKB-201ENST00000406938 CCZ1BP86790 482 aa21.92■■□□□ 1.1
CHKB-201ENST00000406938 CCZ1P86791 482 aaPredicted RBP21.92■■□□□ 1.1
CHKB-201ENST00000406938 FAM71AQ8IYT1 594 aa21.92■■□□□ 1.1
CHKB-201ENST00000406938 CCDC112Q8NEF3 446 aa21.92■■□□□ 1.1
CHKB-201ENST00000406938 TRIM44Q96DX7 344 aaPredicted RBP21.92■■□□□ 1.1
CHKB-201ENST00000406938 NRDE2Q9H7Z3 1164 aa21.92■■□□□ 1.1
CHKB-201ENST00000406938 CISHQ9NSE2 258 aa21.92■■□□□ 1.1
CHKB-201ENST00000406938 GDAP2Q9NXN4 497 aa21.92■■□□□ 1.1
CHKB-201ENST00000406938 CXXC1Q9P0U4 656 aaPredicted RBP21.92■■□□□ 1.1
CHKB-201ENST00000406938 B3GAT3O94766 335 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 KRT5P13647 590 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 FMNL3Q8IVF7 1028 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 RC3H2Q9HBD1 1191 aaKnown RBP21.91■■□□□ 1.1
CHKB-201ENST00000406938 FNDC1Q4ZHG4 1894 aaPredicted RBP21.91■■□□□ 1.1
CHKB-201ENST00000406938 F8W810 466 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 KIF4AO95239 1232 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 FERP16591 822 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 OR1G1P47890 313 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 CDH8P55286 799 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 HGSNATQ68CP4 663 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 TMEM270Q6UE05 265 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 IRF2BP2Q7Z5L9 587 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 HASPINQ8TF76 798 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 HERVK_113Q902F9 699 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 ZNF689Q96CS4 500 aaPredicted RBP21.91■■□□□ 1.1
CHKB-201ENST00000406938 CYP3A43Q9HB55 503 aa21.91■■□□□ 1.1
CHKB-201ENST00000406938 PCDHB4Q9Y5E5 795 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms