RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 CHST13Q8NET6 341 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 MRPL40Q9NQ50 206 aaKnown RBP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 DNAJC17Q9NVM6 304 aaKnown RBP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 PPARGC1AQ9UBK2 798 aaKnown RBP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 TRPA1O75762 1119 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 RTN3O95197 1032 aaPredicted RBP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 PYGBP11216 843 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 KRT76Q01546 638 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 COASYQ13057 564 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 ZNF211Q13398 564 aaPredicted RBP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 SEC23AQ15436 765 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 MFSD14CQ5VZR4 134 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 STK32AQ8WU08 396 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 DEPDC1BQ8WUY9 529 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 BAP1Q92560 729 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 DACT3Q96B18 629 aaPredicted RBP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 CFAP36Q96G28 342 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 RNPEPL1Q9HAU8 725 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 G3BP2Q9UN86 482 aaKnown RBP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 APOBEC2Q9Y235 224 aaKnown RBP8.52□□□□□ -1.05
LTBP1-202ENST00000404525 SPEF2Q9C093 1822 aa8.52□□□□□ -1.05
LTBP1-202ENST00000404525 DPPA5A6NC42 116 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 ZBTB24O43167 697 aaPredicted RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 GGPS1O95749 300 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 CALB1P05937 261 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 RARAP10276 462 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 VHLP40337 213 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 RAB27AP51159 221 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TROAPQ12815 778 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 LONRF1Q17RB8 773 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TMCO4Q5TGY1 634 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 MAP1SQ66K74 1059 aaPredicted RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TRIML2Q8N7C3 387 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 GMCL1Q96IK5 515 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TRIM15Q9C019 465 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 CPSF3Q9UKF6 684 aaKnown RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 STRIP2Q9ULQ0 834 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 E9PMD0 336 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 RBAK-RBAKDNI3L0D1 243 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 SHBGP04278 402 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 SHMT1P34896 483 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 CDR2Q01850 454 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 ARL13BQ3SXY8 428 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 CDCA2Q69YH5 1023 aaPredicted RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 C4orf50Q6ZRC1 276 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 EPM2AIP1Q7L775 607 aaPredicted RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 AMIGO3Q86WK7 504 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 SIX6OS1Q8N1H7 587 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 GPRC5AQ8NFJ5 357 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 GIPC2Q8TF65 315 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TLCD1Q96CP7 247 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 HEXIM2Q96MH2 286 aaKnown RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 RPF1Q9H9Y2 349 aaKnown RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 DDX4Q9NQI0 724 aaKnown RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 FAM8A1Q9UBU6 413 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 A0A0G2JND7 137 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 A8MUI8 341 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 H0YGN5 161 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 WFS1O76024 890 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 HSPA4LO95757 839 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 KRT10P13645 584 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 ATP6V1C1P21283 382 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 PSMA2P25787 234 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 ANXA13P27216 316 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 SFNP31947 248 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 RHBDL3P58872 404 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 OSTNP61366 133 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 NAALADL2Q58DX5 795 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 ZNF667Q5HYK9 610 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TEDDM1Q5T9Z0 273 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 SCARA5Q6ZMJ2 495 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 SKA2Q8WVK7 121 aaPredicted RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 FAM167AQ96KS9 214 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 NEUROG2Q9H2A3 272 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 MRPL46Q9H2W6 279 aaKnown RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 JMJD4Q9H9V9 463 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 NFS1Q9Y697 457 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 KPNA7A9QM74 516 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 WDR64B1ANS9 1081 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 HAUS5O94927 633 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 NUDT17P0C025 328 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 SERPINB4P48594 390 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 PRELPP51888 382 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 KNOP1Q1ED39 458 aaKnown RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TMTC4Q5T4D3 741 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TRMT10CQ7L0Y3 403 aaKnown RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 MYLK4Q86YV6 388 aaPredicted RBP8.51□□□□□ -1.05
LTBP1-202ENST00000404525 KIAA0895Q8NCT3 520 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 NKX2-3Q8TAU0 364 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 FBXO25Q8TCJ0 367 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 GORASP1Q9BQQ3 440 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 TMEM260Q9NX78 707 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 SENP1Q9P0U3 644 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 ZFP69BQ9UJL9 534 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 NID2Q14112 1375 aa8.51□□□□□ -1.05
LTBP1-202ENST00000404525 MYMKA6NI61 221 aa8.5□□□□□ -1.05
LTBP1-202ENST00000404525 CXCL11O14625 94 aa8.5□□□□□ -1.05
LTBP1-202ENST00000404525 ACADSP16219 412 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms