RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 VPS52Q8N1B4 723 aa31.59■■■□□ 2.65
USP42-202ENST00000404008 HPDLQ96IR7 371 aa31.59■■■□□ 2.65
USP42-202ENST00000404008 HERC2P3Q9BVR0 1158 aa31.59■■■□□ 2.65
USP42-202ENST00000404008 LMAN2LQ9H0V9 348 aa31.59■■■□□ 2.65
USP42-202ENST00000404008 MYO9BQ13459 2157 aa31.59■■■□□ 2.65
USP42-202ENST00000404008 ZNF18P17022 549 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 FMO5P49326 533 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 MYL6P60660 151 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 KCNH2Q12809 1159 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 MYO1EQ12965 1108 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 FAM171A1Q5VUB5 890 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 TAS1R2Q8TE23 839 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 ZBP1Q9H171 429 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 XYLT2Q9H1B5 865 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 TLR9Q9NR96 1032 aa31.58■■■□□ 2.65
USP42-202ENST00000404008 BECN2A8MW95 431 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 KPNA7A9QM74 516 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 M0QZQ0 153 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 HLA-DRAP01903 254 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 AFPP02771 609 aaKnown RBP31.57■■■□□ 2.64
USP42-202ENST00000404008 ATICP31939 592 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 PIK3CAP42336 1068 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 ERVFC1P60507 584 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 FAM200AQ8TCP9 573 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 TUBGCP2Q9BSJ2 902 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 CHST7Q9NS84 486 aa31.57■■■□□ 2.64
USP42-202ENST00000404008 PMM2O15305 246 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 STAU1O95793 577 aaKnown RBP31.56■■■□□ 2.64
USP42-202ENST00000404008 MAN2A1Q16706 1144 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 USP41Q3LFD5 358 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 PDZRN4Q6ZMN7 1036 aaPredicted RBP31.56■■■□□ 2.64
USP42-202ENST00000404008 LUZP1Q86V48 1076 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 B3GALT6Q96L58 329 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 REV3LO60673 3130 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 N4BP1O75113 896 aaKnown RBP31.56■■■□□ 2.64
USP42-202ENST00000404008 FGFR3P22607 806 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 MYL7Q01449 175 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 DSTYKQ6XUX3 929 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 DEFB123Q8N688 67 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 FBXL13Q8NEE6 735 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 SENP8Q96LD8 212 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 TCF25Q9BQ70 676 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 VRTNQ9H8Y1 702 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 GDAP2Q9NXN4 497 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 PCDHB8Q9UN66 801 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 COQ4Q9Y3A0 265 aa31.56■■■□□ 2.64
USP42-202ENST00000404008 FSCN2O14926 492 aa31.55■■■□□ 2.64
USP42-202ENST00000404008 SYN3O14994 580 aa31.55■■■□□ 2.64
USP42-202ENST00000404008 CTSAP10619 480 aa31.55■■■□□ 2.64
USP42-202ENST00000404008 PRKCSHP14314 528 aaPredicted RBP31.55■■■□□ 2.64
USP42-202ENST00000404008 TKTP29401 623 aaKnown RBP31.55■■■□□ 2.64
USP42-202ENST00000404008 PTPROQ16827 1216 aa31.55■■■□□ 2.64
USP42-202ENST00000404008 SGSM1Q2NKQ1 1148 aa31.55■■■□□ 2.64
USP42-202ENST00000404008 RTP2Q5QGT7 225 aa31.55■■■□□ 2.64
USP42-202ENST00000404008 MRPL38Q96DV4 380 aaKnown RBP31.55■■■□□ 2.64
USP42-202ENST00000404008 TTPALQ9BTX7 342 aa31.55■■■□□ 2.64
USP42-202ENST00000404008 ENTPD7Q9NQZ7 604 aa31.55■■■□□ 2.64
USP42-202ENST00000404008 P4HA2O15460 535 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 CSPG5O95196 566 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 ASS1P00966 412 aaKnown RBP31.54■■■□□ 2.64
USP42-202ENST00000404008 IRS1P35568 1242 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 GLUD2P49448 558 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 DSG1Q02413 1049 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 KRT31Q15323 416 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 ZNF699Q32M78 642 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 MIIPQ5JXC2 388 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 TMC7Q7Z402 723 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 CEP57Q86XR8 500 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 TAF4BQ92750 862 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 SEMA4DQ92854 862 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 RAB20Q9NX57 234 aa31.54■■■□□ 2.64
USP42-202ENST00000404008 CYB561D2O14569 222 aa31.53■■■□□ 2.64
USP42-202ENST00000404008 URODP06132 367 aa31.53■■■□□ 2.64
USP42-202ENST00000404008 ODC1P11926 461 aa31.53■■■□□ 2.64
USP42-202ENST00000404008 VWA3BQ502W6 1294 aa31.53■■■□□ 2.64
USP42-202ENST00000404008 KIAA0319Q5VV43 1072 aa31.53■■■□□ 2.64
USP42-202ENST00000404008 PDE12Q6L8Q7 609 aaKnown RBP31.53■■■□□ 2.64
USP42-202ENST00000404008 NGRNQ9NPE2 291 aaKnown RBP31.53■■■□□ 2.64
USP42-202ENST00000404008 LIMA1Q9UHB6 759 aaKnown RBP31.53■■■□□ 2.64
USP42-202ENST00000404008 SNX9Q9Y5X1 595 aa31.53■■■□□ 2.64
USP42-202ENST00000404008 ATP1A3P13637 1013 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 ADGRE1Q14246 886 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 SMC1AQ14683 1233 aaKnown RBP31.52■■■□□ 2.64
USP42-202ENST00000404008 PTPN14Q15678 1187 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 PLPP4Q5VZY2 271 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 KIAA1841Q6NSI8 718 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 AUTS2Q8WXX7 1259 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 PI4K2AQ9BTU6 479 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 NDST4Q9H3R1 872 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 TAB2Q9NYJ8 693 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 LMCD1Q9NZU5 365 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 PCDHGC5Q9Y5F6 944 aa31.52■■■□□ 2.64
USP42-202ENST00000404008 ARHGEF37A1IGU5 675 aa31.51■■■□□ 2.63
USP42-202ENST00000404008 LRRN2O75325 713 aa31.51■■■□□ 2.63
USP42-202ENST00000404008 POU3F3P20264 500 aaPredicted RBP31.51■■■□□ 2.63
USP42-202ENST00000404008 CDK11BP21127 795 aaKnown RBP31.51■■■□□ 2.63
USP42-202ENST00000404008 BMS1Q14692 1282 aaKnown RBP31.51■■■□□ 2.63
USP42-202ENST00000404008 WDR72Q3MJ13 1102 aa31.51■■■□□ 2.63
USP42-202ENST00000404008 GPR65Q8IYL9 337 aa31.51■■■□□ 2.63
USP42-202ENST00000404008 APPL2Q8NEU8 664 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms