RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 UVSSAQ2YD98 709 aa35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 IGSF21Q96ID5 467 aa35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 IMPG2Q9BZV3 1241 aa35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 SPG21Q9NZD8 308 aa35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 CTNNB1P35222 781 aa35.78■■■■□ 3.32
CSNK1E-204ENST00000403904 BMPR1AP36894 532 aa35.78■■■■□ 3.32
CSNK1E-204ENST00000403904 KCNMA1Q12791 1236 aa35.78■■■■□ 3.32
CSNK1E-204ENST00000403904 PTPN21Q16825 1174 aa35.78■■■■□ 3.32
CSNK1E-204ENST00000403904 SV2CQ496J9 727 aa35.78■■■■□ 3.32
CSNK1E-204ENST00000403904 XPO4Q9C0E2 1151 aaKnown RBP35.78■■■■□ 3.32
CSNK1E-204ENST00000403904 INTS2Q9H0H0 1204 aaKnown RBP35.78■■■■□ 3.32
CSNK1E-204ENST00000403904 KPNA7A9QM74 516 aa35.77■■■■□ 3.32
CSNK1E-204ENST00000403904 I3L4J1 428 aa35.77■■■■□ 3.32
CSNK1E-204ENST00000403904 LRMPQ12912 555 aa35.77■■■■□ 3.32
CSNK1E-204ENST00000403904 WDR72Q3MJ13 1102 aa35.77■■■■□ 3.32
CSNK1E-204ENST00000403904 APOBEC3GQ9HC16 384 aaKnown RBP35.77■■■■□ 3.32
CSNK1E-204ENST00000403904 RWDD3Q9Y3V2 267 aa35.77■■■■□ 3.32
CSNK1E-204ENST00000403904 STAU1O95793 577 aaKnown RBP35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 PON1P27169 355 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 NOP14P78316 857 aaKnown RBP35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 LRIT3Q3SXY7 679 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 TIGD5Q53EQ6 642 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 WDR44Q5JSH3 913 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 PPP2R2DQ66LE6 453 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 CCDC150Q8NCX0 1101 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 TAF4BQ92750 862 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 TGS1Q96RS0 853 aaKnown RBP35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 VRTNQ9H8Y1 702 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 SLC28A3Q9HAS3 691 aa35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 NXF1Q9UBU9 619 aaKnown RBP35.76■■■■□ 3.32
CSNK1E-204ENST00000403904 CARNS1A5YM72 827 aa35.76■■■■□ 3.31
CSNK1E-204ENST00000403904 PPM1AP35813 382 aa35.76■■■■□ 3.31
CSNK1E-204ENST00000403904 SARM1Q6SZW1 724 aa35.76■■■■□ 3.31
CSNK1E-204ENST00000403904 KLHL23Q8NBE8 558 aa35.76■■■■□ 3.31
CSNK1E-204ENST00000403904 TMEM169Q96HH4 297 aa35.76■■■■□ 3.31
CSNK1E-204ENST00000403904 SNX9Q9Y5X1 595 aa35.76■■■■□ 3.31
CSNK1E-204ENST00000403904 CDH23Q9H251 3354 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 AARSP49588 968 aaKnown RBP eCLIP35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 APBA1Q02410 837 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 SYCP1Q15431 976 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 ZNF667Q5HYK9 610 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 TRIM65Q6PJ69 517 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 DSTYKQ6XUX3 929 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 TATDN2Q93075 761 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 TIFAQ96CG3 184 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 GPR62Q9BZJ7 368 aa35.75■■■■□ 3.31
CSNK1E-204ENST00000403904 GOLGA6L3A6NEY3 463 aa35.74■■■■□ 3.31
CSNK1E-204ENST00000403904 FGF18O76093 207 aa35.74■■■■□ 3.31
CSNK1E-204ENST00000403904 KLK7P49862 253 aa35.74■■■■□ 3.31
CSNK1E-204ENST00000403904 FUT10Q6P4F1 479 aa35.74■■■■□ 3.31
CSNK1E-204ENST00000403904 SENP8Q96LD8 212 aa35.74■■■■□ 3.31
CSNK1E-204ENST00000403904 ERGIC2Q96RQ1 377 aa35.74■■■■□ 3.31
CSNK1E-204ENST00000403904 CERS4Q9HA82 394 aa35.74■■■■□ 3.31
CSNK1E-204ENST00000403904 POLIQ9UNA4 740 aa35.74■■■■□ 3.31
CSNK1E-204ENST00000403904 ERVK-21P61565 698 aa35.73■■■■□ 3.31
CSNK1E-204ENST00000403904 TRIM5Q9C035 493 aa35.73■■■■□ 3.31
CSNK1E-204ENST00000403904 GDAP2Q9NXN4 497 aa35.73■■■■□ 3.31
CSNK1E-204ENST00000403904 SUSD3Q96L08 255 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 PLVAPQ9BX97 442 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 VN1R3Q9BXE9 311 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 SIK3Q9Y2K2 1263 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 SF3B1O75533 1304 aaKnown RBP eCLIP35.72■■■■□ 3.312e-6■■■■■ 43.1
CSNK1E-204ENST00000403904 PLXNA4Q9HCM2 1894 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 FSD2A1L4K1 749 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 CYB561D2O14569 222 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 CBFA2T2O43439 604 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 TRAPPC3O43617 180 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 TNNC1P63316 161 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 PCMTD1Q96MG8 357 aaPredicted RBP35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 SAMD11Q96NU1 681 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 NT5C1BQ96P26 610 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 MMS19Q96T76 1030 aa35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 LSM14BQ9BX40 385 aaKnown RBP35.72■■■■□ 3.31
CSNK1E-204ENST00000403904 C5orf67F2Z3F1 127 aa35.71■■■■□ 3.31
CSNK1E-204ENST00000403904 PAX3P23760 479 aa35.71■■■■□ 3.31
CSNK1E-204ENST00000403904 PHLDB3Q6NSJ2 640 aa35.71■■■■□ 3.31
CSNK1E-204ENST00000403904 SCARA5Q6ZMJ2 495 aa35.71■■■■□ 3.31
CSNK1E-204ENST00000403904 SIX2Q9NPC8 291 aa35.71■■■■□ 3.31
CSNK1E-204ENST00000403904 M0QZQ0 153 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 EFEMP2O95967 443 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 TPM3P06753 285 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 PLCB3Q01970 1234 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 KRT17Q04695 432 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 FAM171A1Q5VUB5 890 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 DPY19L2P1Q6NXN4 242 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 TAS1R1Q7RTX1 841 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 ARHGEF19Q8IW93 802 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 NIF3L1Q9GZT8 377 aa35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 ALG13Q9NP73 1137 aaKnown RBP35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 TIMM13Q9Y5L4 95 aaPredicted RBP35.7■■■■□ 3.31
CSNK1E-204ENST00000403904 VWA8A3KMH1 1905 aa35.69■■■■□ 3.3
CSNK1E-204ENST00000403904 PPM1KQ8N3J5 372 aa35.69■■■■□ 3.3
CSNK1E-204ENST00000403904 B3GALT6Q96L58 329 aa35.69■■■■□ 3.3
CSNK1E-204ENST00000403904 FAM207AQ9NSI2 230 aaPredicted RBP35.69■■■■□ 3.3
CSNK1E-204ENST00000403904 HUS1O60921 280 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 RB1P06400 928 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 P4HA1P13674 534 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 ASPAP45381 313 aa35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 ELAVL2Q12926 359 aaKnown RBP35.68■■■■□ 3.3
CSNK1E-204ENST00000403904 SOWAHAQ2M3V2 549 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms