RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 PKNOX2Q96KN3 472 aa19.04■□□□□ 0.64
CHTOP-205ENST00000403433 ERAP1Q9NZ08 941 aa19.04■□□□□ 0.64
CHTOP-205ENST00000403433 ANK1P16157 1881 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 UTRNP46939 3433 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 ZSWIM8A7E2V4 1837 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 TNNC2P02585 160 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 GJB1P08034 283 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 CD58P19256 250 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 CLCN3P51790 818 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 PMS2P54278 862 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 EIF3BP55884 814 aaKnown RBP19.03■□□□□ 0.64
CHTOP-205ENST00000403433 IFFO1Q0D2I5 559 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 PPP1R7Q15435 360 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 EMC10Q5UCC4 262 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 TTC19Q6DKK2 380 aaPredicted RBP19.03■□□□□ 0.64
CHTOP-205ENST00000403433 PLEKHA7Q6IQ23 1121 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 RHOT1Q8IXI2 618 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 THNSL1Q8IYQ7 743 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 FBXO25Q8TCJ0 367 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 GTF3C2Q8WUA4 911 aaPredicted RBP19.03■□□□□ 0.64
CHTOP-205ENST00000403433 ZNF606Q8WXB4 792 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 FZD8Q9H461 694 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 PDGFCQ9NRA1 345 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 PARVAQ9NVD7 372 aa19.03■□□□□ 0.64
CHTOP-205ENST00000403433 PLXNA1Q9UIW2 1896 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 ASAP2O43150 1006 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 LSM8O95777 96 aaKnown RBP19.02■□□□□ 0.64
CHTOP-205ENST00000403433 MAN1A1P33908 653 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 PDCLQ13371 301 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 ZNF699Q32M78 642 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 AGBL2Q5U5Z8 902 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 SCARA3Q6AZY7 606 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 ARMCX2Q7L311 632 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 CCDC50Q8IVM0 306 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 ARFGAP2Q8N6H7 521 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 DDX27Q96GQ7 796 aaKnown RBP19.02■□□□□ 0.64
CHTOP-205ENST00000403433 ANKRD36BP1Q96IX9 119 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 ZNF668Q96K58 619 aaPredicted RBP19.02■□□□□ 0.64
CHTOP-205ENST00000403433 FAM129AQ9BZQ8 928 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 PTPRHQ9HD43 1115 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 CISHQ9NSE2 258 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 PLXNB2O15031 1838 aa19.02■□□□□ 0.64
CHTOP-205ENST00000403433 HOXC6P09630 235 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 KCNJ1P48048 391 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 MBTD1Q05BQ5 628 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 LLGL1Q15334 1064 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 TMEM63BQ5T3F8 832 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 FEZF2Q8TBJ5 459 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 C1orf54Q8WWF1 131 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 SLCO2A1Q92959 643 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 EFCC1Q9HA90 598 aa19.02■□□□□ 0.63
CHTOP-205ENST00000403433 TLR3O15455 904 aaKnown RBP19.01■□□□□ 0.63
CHTOP-205ENST00000403433 B4GALT5O43286 388 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 B4GALT4O60513 344 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 CALB1P05937 261 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 YBX3P16989 372 aaKnown RBP eCLIP19.01■□□□□ 0.631e-9■■□□□ 12.3
CHTOP-205ENST00000403433 MMP8P22894 467 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 BRD2P25440 801 aaKnown RBP19.01■□□□□ 0.63
CHTOP-205ENST00000403433 GJA5P36382 358 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 OSTNP61366 133 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 YWHAEP62258 255 aaKnown RBP19.01■□□□□ 0.63
CHTOP-205ENST00000403433 KRT71Q3SY84 523 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 DENND2CQ68D51 928 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 FOXR1Q6PIV2 292 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 HOOK3Q86VS8 718 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 UPF1Q92900 1129 aaKnown RBP eCLIP19.01■□□□□ 0.633e-7■□□□□ 9.9
CHTOP-205ENST00000403433 PABPC3Q9H361 631 aaKnown RBP19.01■□□□□ 0.63
CHTOP-205ENST00000403433 BCCIPQ9P287 314 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHTOP-205ENST00000403433 IP6K2Q9UHH9 426 aa19.01■□□□□ 0.63
CHTOP-205ENST00000403433 EVPLQ92817 2033 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 IL18RAPO95256 599 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 C22orf31O95567 290 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 CYP2C8P10632 490 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 HPDP32754 393 aaPredicted RBP19■□□□□ 0.63
CHTOP-205ENST00000403433 SSR1P43307 286 aaKnown RBP19■□□□□ 0.63
CHTOP-205ENST00000403433 PHKA2P46019 1235 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 IGBP1P78318 339 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 CCNA1P78396 465 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 KRT17Q04695 432 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 ARHGAP1Q07960 439 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 CALCOCO2Q13137 446 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 SNX1Q13596 522 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 LAMC2Q13753 1193 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 EAPPQ56P03 285 aaPredicted RBP19■□□□□ 0.63
CHTOP-205ENST00000403433 ZNF484Q5JVG2 852 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 DAB2IPQ5VWQ8 1189 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 EEF1DP3Q658K8 133 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 SCARA5Q6ZMJ2 495 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 SYDE1Q6ZW31 735 aaPredicted RBP19■□□□□ 0.63
CHTOP-205ENST00000403433 TMEM35BQ8NCS4 154 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 GRK7Q8WTQ7 553 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 CDT1Q9H211 546 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 RPF1Q9H9Y2 349 aaKnown RBP19■□□□□ 0.63
CHTOP-205ENST00000403433 TNFSF13BQ9Y275 285 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 USTQ9Y2C2 406 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 CEP83Q9Y592 693 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 ZNF394Q53GI3 561 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 KATNAL2Q8IYT4 538 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 GPRC5AQ8NFJ5 357 aa19■□□□□ 0.63
CHTOP-205ENST00000403433 BCAS4Q8TDM0 211 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms