RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PON2Q15165 354 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ECM1Q16610 540 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PLA2G2CQ5R387 149 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 STPG1Q5TH74 334 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ATF7IP2Q5U623 682 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TAS1R3Q7RTX0 852 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 UROC1Q96N76 676 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CDT1Q9H211 546 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 GTSE1Q9NYZ3 720 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PCNX2A6NKB5 2137 aa13.07□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CHADO15335 359 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 EPN2O95208 641 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 OR4Q2P0C623 313 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ZNF806P0C7X5 589 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CYP11B2P19099 503 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 MLLT6P55198 1093 aaPredicted RBP13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 OSTNP61366 133 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TNK2Q07912 1038 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 DCAF4L1Q3SXM0 396 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 AASDHQ4L235 1098 aaPredicted RBP13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CYP4A22Q5TCH4 519 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 IL31Q6EBC2 164 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 BEST2Q8NFU1 509 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 NAP1L4Q99733 375 aaKnown RBP13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 LSM14BQ9BX40 385 aaKnown RBP13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 C2orf40Q9H1Z8 148 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 AFF4Q9UHB7 1163 aaKnown RBP13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TPCN1Q9ULQ1 816 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
SPTLC1P3-201ENST00000403408 A0A1W2PRU2 124 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 SYN3O14994 580 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PRAMEF12O95522 483 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 SPINK2P20155 84 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 GRM5P41594 1212 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 NAMPTP43490 491 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CTXN3Q4LDR2 81 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TPGS2Q68CL5 300 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 GAREM2Q75VX8 874 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CEP68Q76N32 757 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ARID3BQ8IVW6 561 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TTC9BQ8N6N2 239 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 DDX12PQ92771 950 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 SUSD3Q96L08 255 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ZNF512Q96ME7 567 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CCDC43Q96MW1 224 aaKnown RBP13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ACO2Q99798 780 aaKnown RBP13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ADPGKQ9BRR6 497 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ZMIZ1Q9ULJ6 1067 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 YIPF1Q9Y548 306 aa13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 NUP210Q8TEM1 1887 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 HELZ2Q9BYK8 2649 aaKnown RBP13.05□□□□□ -0.32
SPTLC1P3-201ENST00000403408 OTOL1A6NHN0 477 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 BTBD18B2RXH4 712 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 SOAT2O75908 522 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 KCNE1P15382 129 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 LRRC32Q14392 662 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 DAW1Q8N136 415 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 DEPTORQ8TB45 409 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CSGALNACT1Q8TDX6 532 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 DDX1Q92499 740 aaKnown RBP13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ZBTB45Q96K62 511 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 C8orf33Q9H7E9 229 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ASAH2Q9NR71 780 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 SH2B1Q9NRF2 756 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TNFSF13BQ9Y275 285 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TIMM13Q9Y5L4 95 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CYP46A1Q9Y6A2 500 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 NUP205Q92621 2012 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ANK1P16157 1881 aa13.04□□□□□ -0.32
SPTLC1P3-201ENST00000403408 NEMFO60524 1076 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PFKFB2O60825 505 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PROZP22891 400 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 KRT2P35908 639 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 SEZ6Q53EL9 994 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 DGKKQ5KSL6 1271 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 PSAPL1Q6NUJ1 521 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 RIN3Q8TB24 985 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 NACC1Q96RE7 527 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TMEM209Q96SK2 561 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 POLR3CQ9BUI4 534 aaPredicted RBP13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TM6SF1Q9BZW5 370 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 SLITRK6Q9H5Y7 841 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 FBRSL1Q9HCM7 1045 aaKnown RBP13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 TUFT1Q9NNX1 390 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
SPTLC1P3-201ENST00000403408 ORC3Q9UBD5 711 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms