RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CYP4F11Q9HBI6 524 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ARHGEF38Q9NXL2 777 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ZC3H13Q5T200 1668 aaKnown RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 BTBD19C9JJ37 291 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 THRAP10827 490 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 PMLP29590 882 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 IFI35P80217 286 aaPredicted RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 HIF1AQ16665 826 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 NEK10Q6ZWH5 1172 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 RMDN1Q96DB5 314 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 BTBD6Q96KE9 485 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 NT5C1BQ96P26 610 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ZSWIM1Q9BR11 485 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 PCDHA12Q9UN75 941 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ALKQ9UM73 1620 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 GOLGA8IPA6NC78 632 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 FAM196BA6NMK8 535 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 STAM2O75886 525 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 VDRP11473 427 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 POLR2BP30876 1174 aaKnown RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 CD97P48960 835 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 SLC15A2Q16348 729 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 TMEM53Q6P2H8 277 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 CLVS1Q8IUQ0 354 aaPredicted RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 ZBTB38Q8NAP3 1195 aaPredicted RBP10.47□□□□□ -0.73
PTPRM-203ENST00000400060 FBXO25Q8TCJ0 367 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 BTG4Q9NY30 223 aa10.47□□□□□ -0.73
PTPRM-203ENST00000400060 CIITAP33076 1130 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 SNX17Q15036 470 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 KCTD21Q4G0X4 260 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 TTC39BQ5VTQ0 682 aaPredicted RBP10.46□□□□□ -0.73
PTPRM-203ENST00000400060 FOXR2Q6PJQ5 311 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 CYB5R4Q7L1T6 521 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 SLC13A5Q86YT5 568 aaPredicted RBP10.46□□□□□ -0.73
PTPRM-203ENST00000400060 PLD3Q8IV08 490 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 RHOT1Q8IXI2 618 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 DEPDC1BQ8WUY9 529 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 EFHD2Q96C19 240 aaPredicted RBP10.46□□□□□ -0.73
PTPRM-203ENST00000400060 MTMR8Q96EF0 704 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 C1orf112Q9NSG2 853 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 PNPLA3Q9NST1 481 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 REXO2Q9Y3B8 237 aaKnown RBP10.46□□□□□ -0.73
PTPRM-203ENST00000400060 C15orf38-AP3S2A0A0A6YYH1 394 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 FCHO1O14526 889 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 DLATP10515 647 aaKnown RBP10.46□□□□□ -0.73
PTPRM-203ENST00000400060 EFTUD2Q15029 972 aaKnown RBP eCLIP10.46□□□□□ -0.73
PTPRM-203ENST00000400060 BBS9Q3SYG4 887 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 TRIM60Q495X7 471 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 PDXDC2PQ6P474 469 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 TMC4Q7Z404 712 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 ARPINQ7Z6K5 226 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 CCDC103Q8IW40 242 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 ALLCQ8N6M5 410 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 VPS11Q9H270 941 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 C8orf4Q9NR00 106 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 TRIM17Q9Y577 477 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 CDY2AQ9Y6F7 541 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 CDY1Q9Y6F8 540 aa10.46□□□□□ -0.73
PTPRM-203ENST00000400060 FRMPD4Q14CM0 1322 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 RBAK-RBAKDNI3L0D1 243 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 DLGAP3O95886 979 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 CAPN1P07384 714 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 CTSWP56202 376 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 GRPEL2Q8TAA5 225 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 SPATA20Q8TB22 786 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 SEPT1Q8WYJ6 367 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 CNOT8Q9UFF9 292 aaKnown RBP10.46□□□□□ -0.74
PTPRM-203ENST00000400060 TFR2Q9UP52 801 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 RPS6KL1Q9Y6S9 549 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 KIF20BQ96Q89 1820 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 GUCY1B2O75343 617 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 CBX6O95503 412 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 MYL2P10916 166 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 FCGR1AP12314 374 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 RAG1P15918 1043 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.74
PTPRM-203ENST00000400060 ATICP31939 592 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 PIK3CAP42336 1068 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 ALDH1A3P47895 512 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 COASYQ13057 564 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 ZNF618Q5T7W0 954 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 RSBN1Q5VWQ0 802 aaPredicted RBP10.46□□□□□ -0.74
PTPRM-203ENST00000400060 INPP4AQ96PE3 977 aaPredicted RBP10.46□□□□□ -0.74
PTPRM-203ENST00000400060 AGPAT1Q99943 283 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 DHX36Q9H2U1 1008 aaKnown RBP10.46□□□□□ -0.74
PTPRM-203ENST00000400060 GPHNQ9NQX3 736 aaPredicted RBP10.46□□□□□ -0.74
PTPRM-203ENST00000400060 RTCBQ9Y3I0 505 aaKnown RBP10.46□□□□□ -0.74
PTPRM-203ENST00000400060 NEU2Q9Y3R4 380 aa10.46□□□□□ -0.74
PTPRM-203ENST00000400060 A8MUI8 341 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 IDH3BO43837 385 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 TBC1D25Q3MII6 688 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 TLK2Q86UE8 772 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 ZNF555Q8NEP9 628 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 CEP95Q96GE4 821 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 NUP85Q9BW27 656 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 TMEM206Q9H813 350 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 PCYOX1Q9UHG3 505 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 NAALADL1Q9UQQ1 740 aa10.45□□□□□ -0.74
PTPRM-203ENST00000400060 TFRCP02786 760 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms