RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 ZFP69BQ9UJL9 534 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CACNA1EQ15878 2313 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TARSL2A2RTX5 802 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 GRID2IPA4D2P6 1211 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 RAD51CO43502 376 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 DGAT1O75907 488 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 PRKCBP05771 671 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ORC1Q13415 861 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 MORF4L2Q15014 288 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 EPHA7Q15375 998 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 NAB2Q15742 525 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TKFCQ3LXA3 575 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 C1orf146Q5VVC0 180 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CCNYL1Q8N7R7 359 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ENGASEQ8NFI3 743 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 OR2W6PQ8NHA6 318 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TPCN2Q8NHX9 752 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TTC8Q8TAM2 541 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 DHX38Q92620 1227 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 TRIM51Q9BSJ1 452 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 MTA3Q9BTC8 594 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ECT2Q9H8V3 914 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 XAB2Q9HCS7 855 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 TBX20Q9UMR3 447 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SLC8A2Q9UPR5 921 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TANC2Q9HCD6 1990 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SYNDIG1LA6NDD5 238 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ITGB3P05106 788 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 KLRC1P26715 233 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 PMS1P54277 932 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 LRRC36Q1X8D7 754 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 KRT80Q6KB66 452 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 HHIPL2Q6UWX4 724 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TADA2BQ86TJ2 420 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 LCA5Q86VQ0 697 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 RASSF3Q86WH2 238 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ATL2Q8NHH9 583 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 RBM46Q8TBY0 533 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 ARL8AQ96BM9 186 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CPB2Q96IY4 423 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TMEM8AQ9HCN3 771 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TRPC7Q9HCX4 862 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 AGPAT3Q9NRZ7 376 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TET1Q8NFU7 2136 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 C4AP0C0L4 1744 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 C4BP0C0L5 1744 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TCRBV5S4A2TA0A5A2 114 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TLR2O60603 784 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SNX2O60749 519 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 MED24O75448 989 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 RARBP10826 455 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 KRT10P13645 584 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 GYS1P13807 737 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 COMTP21964 271 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TPI1P60174 286 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 PHEXP78562 749 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ACTN3Q08043 901 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 PTPAQ15257 358 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 EARS2Q5JPH6 523 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 SPDYAQ5MJ70 313 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 IL31Q6EBC2 164 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 GPAT2Q6NUI2 795 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 PDXDC1Q6P996 788 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 KCNV1Q6PIU1 500 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 MMS22LQ6ZRQ5 1243 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ATP11CQ8NB49 1132 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 CCDC124Q96CT7 223 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 IL17RBQ9NRM6 502 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.42□□□□□ -1.86
KNL1-202ENST00000399668 ERAP1Q9NZ08 941 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 AFF4Q9UHB7 1163 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 NEU2Q9Y3R4 380 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ALG6Q9Y672 507 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 COL5A2P05997 1499 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 HEATR5AQ86XA9 2040 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 FOXN3O00409 490 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 HMBSP08397 361 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ZFXP17010 805 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 KRT4P19013 534 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 BRD2P25440 801 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 GMPSP49915 693 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 EFNA5P52803 228 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ATXN3P54252 364 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 ACTR2P61160 394 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ESRRGP62508 458 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 KDSRQ06136 332 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 BYSLQ13895 437 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 KIZQ2M2Z5 673 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 XKR3Q5GH77 459 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 GNASQ5JWF2 1037 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ATF7IP2Q5U623 682 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 MFSD14CQ5VZR4 134 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 FBXW10Q5XX13 1052 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 FAM117BQ6P1L5 589 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 RGS9BPQ6ZS82 235 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ACAD11Q709F0 780 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 CLMNQ96JQ2 1002 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 CALR3Q96L12 384 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 ATP6V1G3Q96LB4 118 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 C9orf72Q96LT7 481 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms