RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 ZC3H12AQ5D1E8 599 aaKnown RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 CATSPERGQ6ZRH7 1159 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ARMCX6Q7L4S7 300 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 UHMK1Q8TAS1 419 aaKnown RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 DEPTORQ8TB45 409 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ASAP3Q8TDY4 903 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 JPH2Q9BR39 696 aaPredicted RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 DDX23Q9BUQ8 820 aaKnown RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 HAPLN2Q9GZV7 340 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ZNF302Q9NR11 478 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ANAPC5Q9UJX4 755 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 PCDHB4Q9Y5E5 795 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 RALAP11233 206 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ATP4AP20648 1035 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 CHKAP35790 457 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 RFC5P40937 340 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ZNF132P52740 706 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 AP3M2P53677 418 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 GSCP56915 257 aaPredicted RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 TGFB2P61812 414 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 RBBP8NLQ8NC74 664 aaPredicted RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 DNERQ8NFT8 737 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 CCDC114Q96M63 670 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 SCLT1Q96NL6 688 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 C11orf70Q9BRQ4 267 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 LGALS13Q9UHV8 139 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 R3HDM2Q9Y2K5 976 aaKnown RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 SSC5DA1L4H1 1573 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 CNTNAP2Q9UHC6 1331 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 CCT8L1PA6NM43 557 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 K7ERI5 159 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 DNM1LO00429 736 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 GSTA1P08263 222 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 ACOT2P49753 483 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 HMGCS2P54868 508 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 PPARDQ03181 441 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 LMNB2Q03252 620 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 GRM1Q13255 1194 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 SPOPLQ6IQ16 392 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 LRRC34Q8IZ02 419 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 UBR7Q8N806 425 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 CCHCR1Q8TD31 782 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 FAM84AQ96KN4 292 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 PRMT1Q99873 361 aaKnown RBP12.08□□□□□ -0.48
C4orf3-201ENST00000399075 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 OSBPL8Q9BZF1 889 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 PARVAQ9NVD7 372 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 SAMD15Q9P1V8 674 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 BRCA1P38398 1863 aaKnown RBP12.08□□□□□ -0.48
C4orf3-201ENST00000399075 ZNF541Q9H0D2 1346 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 DNAJC8O75937 253 aaPredicted RBP12.08□□□□□ -0.48
C4orf3-201ENST00000399075 ACSL3O95573 720 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 ADCY8P40145 1251 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 CETN2P41208 172 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 SCTRP47872 440 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 NOP14P78316 857 aaKnown RBP12.08□□□□□ -0.48
C4orf3-201ENST00000399075 SP4Q02446 784 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 STXBP2Q15833 593 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 TMEM270Q6UE05 265 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 SLC7A3Q8WY07 619 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
C4orf3-201ENST00000399075 TMEM143Q96AN5 459 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 WRNIP1Q96S55 665 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 IP6K2Q9UHH9 426 aa12.08□□□□□ -0.48
C4orf3-201ENST00000399075 LSM8O95777 96 aaKnown RBP12.07□□□□□ -0.48
C4orf3-201ENST00000399075 GMPSP49915 693 aaPredicted RBP12.07□□□□□ -0.48
C4orf3-201ENST00000399075 TAS2R40P59535 323 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 SP2Q02086 613 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 LONRF1Q17RB8 773 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 LRRC38Q5VT99 294 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 DRICH1Q6PGQ1 229 aaPredicted RBP12.07□□□□□ -0.48
C4orf3-201ENST00000399075 ZNF365Q70YC5 407 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 CCDC50Q8IVM0 306 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 FEZF2Q8TBJ5 459 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 SLC40A1Q9NP59 571 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 NINJ2Q9NZG7 142 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 LRRIQ4A6NIV6 560 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 THAP12O43422 761 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 NEBLO76041 1014 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 ABHD2P08910 425 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 MMP8P22894 467 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 KLRC2P26717 231 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 XRCC4Q13426 336 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 SPRED3Q2MJR0 410 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
C4orf3-201ENST00000399075 LLGL2Q6P1M3 1020 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 ZPBP2Q6X784 338 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
C4orf3-201ENST00000399075 RBM41Q96IZ5 413 aaKnown RBP12.07□□□□□ -0.48
C4orf3-201ENST00000399075 HOXC10Q9NYD6 342 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 PPME1Q9Y570 386 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 NUB1Q9Y5A7 615 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 ACTL7BQ9Y614 415 aa12.07□□□□□ -0.48
C4orf3-201ENST00000399075 NFKBIEO00221 500 aa12.06□□□□□ -0.48
C4orf3-201ENST00000399075 TLR3O15455 904 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms