RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 HIST1H2AJQ99878 128 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 H2AFJQ9BTM1 129 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 KCNF1Q9H3M0 494 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 ZNF556Q9HAH1 456 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 NDFIP2Q9NV92 336 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 WHRNQ9P202 907 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 E7ENQ6 273 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 ACADSP16219 412 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 PTK7Q13308 1070 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 ZNF394Q53GI3 561 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 PID1Q7Z2X4 250 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 JAMLQ86YT9 394 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 STKLD1Q8NE28 680 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 RNF217Q8TC41 542 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 DDI1Q8WTU0 396 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 ELMO2Q96JJ3 720 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 NDUFA13Q9P0J0 144 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 APPL1Q9UKG1 709 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 FAM95CA0A1B0GW59 222 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 TLR2O60603 784 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 RALBP11234 206 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 LCP1P13796 627 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 PSMD7P51665 324 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 GALCP54803 685 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 MRPS35P82673 323 aaKnown RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 TRPM8Q7Z2W7 1104 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 OR6J1Q8NGC5 347 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 CLMNQ96JQ2 1002 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 OSBPL8Q9BZF1 889 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 SLC13A1Q9BZW2 595 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 CASS4Q9NQ75 786 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 PDP2Q9P2J9 529 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 AMACRQ9UHK6 382 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 CNTNAP5Q8WYK1 1306 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 RRN3P2A6NIE6 340 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 H0Y3Z8 333 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 ALDH18A1P54886 795 aaKnown RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 MFN1Q8IWA4 741 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 ZNF34Q8IZ26 560 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 CCT8L2Q96SF2 557 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 PPP1R16BQ96T49 567 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 DNAJC7Q99615 494 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 EPC1Q9H2F5 836 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 TBC1D23Q9NUY8 699 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 PRMT7Q9NVM4 692 aaPredicted RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 DCDC2Q9UHG0 476 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 KIAA1257Q9ULG3 409 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 C5orf58C9J3I9 102 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 PRPF4O43172 522 aaKnown RBP eCLIP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 NCOA4Q13772 614 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 IER5Q5VY09 327 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 E4F1Q66K89 784 aaPredicted RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 NAPEPLDQ6IQ20 393 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 LVRNQ6Q4G3 990 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 ADCK1Q86TW2 530 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 NSL1Q96IY1 281 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 MAGEB18Q96M61 343 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 MXRA8Q9BRK3 442 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 SIKE1Q9BRV8 207 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 TDRD3Q9H7E2 651 aaKnown RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 ZC4H2Q9NQZ6 224 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 HOXC6P09630 235 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 S100A5P33763 92 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 RGS4P49798 205 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 FIGNQ5HY92 759 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 HABP4Q5JVS0 413 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 KSR1Q8IVT5 923 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 WDR24Q96S15 920 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 SPATA16Q9BXB7 569 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ZNF518BQ9C0D4 1074 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 SATB2Q9UPW6 733 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 PTPRMP28827 1452 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 NRXN1Q9ULB1 1477 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 GTPBP10A4D1E9 387 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ZNF263O14978 683 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 DNAJC6O75061 913 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 PDHA1P08559 390 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 AKR1B1P15121 316 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 COILP38432 576 aaPredicted RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 DEFA1P59665 94 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 DEFA3P59666 94 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 KLC1Q07866 573 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ITGA9Q13797 1035 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 SPDYCQ5MJ68 293 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 KLHDC7AQ5VTJ3 777 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 STYK1Q6J9G0 422 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ERP44Q9BS26 406 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 MANSC1Q9H8J5 431 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 KCNH4Q9UQ05 1017 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 COPG1Q9Y678 874 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 NCOA3Q9Y6Q9 1424 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 UBA6A0AVT1 1052 aaPredicted RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 CLASP2O75122 1294 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 FAM107AO95990 144 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ALDH1A1P00352 501 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ENO1P06733 434 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 SLC2A3P11169 496 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 MAPK1P28482 360 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 GRIK1P39086 918 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms