RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ASIC3Q9UHC3 531 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 FEZ2Q9UHY8 353 aaPredicted RBP14.73□□□□□ -0.05
PRAME-202ENST00000398743 AGTPBP1Q9UPW5 1226 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 OTOFQ9HC10 1997 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 IGKV6-21A0A0C4DH24 114 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 ZBTB42B2RXF5 422 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 E7EVH7 732 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 CXCL11O14625 94 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 GAS8O95995 478 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 FGFR4P22455 802 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 CDR1P51861 262 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 SEC24CP53992 1094 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 DUOXA2Q1HG44 320 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 DAB2IPQ5VWQ8 1189 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 KATNAL2Q8IYT4 538 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 MYCBPAPQ8TBZ2 947 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 ATG4AQ8WYN0 398 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 JPH2Q9BR39 696 aaPredicted RBP14.72□□□□□ -0.05
PRAME-202ENST00000398743 HERPUD2Q9BSE4 406 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 DCLK3Q9C098 648 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 R3HDMLQ9H3Y0 253 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 CNOT10Q9H9A5 744 aaKnown RBP14.72□□□□□ -0.05
PRAME-202ENST00000398743 PPANQ9NQ55 473 aaKnown RBP14.72□□□□□ -0.05
PRAME-202ENST00000398743 HOMER3Q9NSC5 361 aa14.72□□□□□ -0.05
PRAME-202ENST00000398743 CPSF3Q9UKF6 684 aaKnown RBP14.72□□□□□ -0.05
PRAME-202ENST00000398743 SOCS7O14512 581 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 RIPK2O43353 540 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 FAM107AO95990 144 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 MMP8P22894 467 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 TMOD1P28289 359 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.05
PRAME-202ENST00000398743 ADCY2Q08462 1091 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 KLF1Q13351 362 aaPredicted RBP14.71□□□□□ -0.05
PRAME-202ENST00000398743 KCTD2Q14681 263 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 SGSM1Q2NKQ1 1148 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 SCARA3Q6AZY7 606 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 SPATS2Q86XZ4 545 aaKnown RBP14.71□□□□□ -0.05
PRAME-202ENST00000398743 RHPN2Q8IUC4 686 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 ANKRD13AQ8IZ07 590 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 FEZF2Q8TBJ5 459 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 ZNF473Q8WTR7 871 aaKnown RBP14.71□□□□□ -0.05
PRAME-202ENST00000398743 FGD4Q96M96 766 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 CCT8L2Q96SF2 557 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 NIF3L1Q9GZT8 377 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 RASSF4Q9H2L5 321 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 TXNRD2Q9NNW7 524 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 FAM169AQ9Y6X4 670 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 ANKRD65E5RJM6 399 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 O00370 1275 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 ABLIM1O14639 778 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 LSM8O95777 96 aaKnown RBP14.71□□□□□ -0.05
PRAME-202ENST00000398743 RALAP11233 206 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 CD58P19256 250 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 ITIH2P19823 946 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 SSR1P43307 286 aaKnown RBP14.71□□□□□ -0.05
PRAME-202ENST00000398743 TAS2R40P59535 323 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 MYL6P60660 151 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 TRPC3Q13507 836 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 PTK6Q13882 451 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 PLCB4Q15147 1175 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 DHX37Q8IY37 1157 aaKnown RBP14.71□□□□□ -0.05
PRAME-202ENST00000398743 SNF8Q96H20 258 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 CLMNQ96JQ2 1002 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 CCDC114Q96M63 670 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 SPATA33Q96N06 139 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 MMP19Q99542 508 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 IP6K2Q9UHH9 426 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 USTQ9Y2C2 406 aa14.71□□□□□ -0.05
PRAME-202ENST00000398743 SRCAPQ6ZRS2 3230 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 SPDYE5A6NIY4 337 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 CALB1P05937 261 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 PAEPP09466 180 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 TMEM191BP0C7N4 346 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 SLC26A2P50443 739 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 C6orf118Q5T5N4 469 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 MPZL3Q6UWV2 235 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 TSHZ1Q6ZSZ6 1077 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 CCDC25Q86WR0 208 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 FBXO16Q8IX29 292 aaPredicted RBP14.7□□□□□ -0.06
PRAME-202ENST00000398743 ATL2Q8NHH9 583 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 EXD1Q8NHP7 514 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 HEMGNQ9BXL5 484 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 CISHQ9NSE2 258 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 DNAJC25-GNG10A0A024R161 153 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 TLDC2A0PJX2 215 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 GMNCA6NCL1 334 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 RGS16O15492 202 aaPredicted RBP14.7□□□□□ -0.06
PRAME-202ENST00000398743 TRAPPC3O43617 180 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 PROZP22891 400 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 TFAMQ00059 246 aaKnown RBP14.7□□□□□ -0.06
PRAME-202ENST00000398743 TFDP1Q14186 410 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 TRMT10CQ7L0Y3 403 aaKnown RBP14.7□□□□□ -0.06
PRAME-202ENST00000398743 NLRP4Q96MN2 994 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 TMEM109Q9BVC6 243 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 OSBPL8Q9BZF1 889 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 RBPJLQ9UBG7 517 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 KCNH4Q9UQ05 1017 aa14.7□□□□□ -0.06
PRAME-202ENST00000398743 R3HDM2Q9Y2K5 976 aaKnown RBP14.7□□□□□ -0.06
PRAME-202ENST00000398743 DICER1Q9UPY3 1922 aaKnown RBP14.7□□□□□ -0.06
PRAME-202ENST00000398743 POLR2AP24928 1970 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms