RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 USP17L12C9JPN9 530 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 USP17L21D6R901 530 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 RASA4O43374 803 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 BUD23O43709 281 aaKnown RBP12.16□□□□□ -0.46
PUM3-202ENST00000397885 ZNF862O60290 1169 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 COPB2P35606 906 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 VPS41P49754 854 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 GALK1P51570 392 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 ACTR3P61158 418 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 DYNLL1P63167 89 aaKnown RBP12.16□□□□□ -0.46
PUM3-202ENST00000397885 TNIP1Q15025 636 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
PUM3-202ENST00000397885 TMEM53Q6P2H8 277 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 TTC27Q6P3X3 843 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 CCDC62Q6P9F0 684 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 SYDE1Q6ZW31 735 aaPredicted RBP12.16□□□□□ -0.46
PUM3-202ENST00000397885 CYP4X1Q8N118 509 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.16□□□□□ -0.46
PUM3-202ENST00000397885 SLC30A5Q8TAD4 765 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 MAML1Q92585 1016 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 DDX12PQ92771 950 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 OSBPL8Q9BZF1 889 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 EBF3Q9H4W6 596 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 ADAMTSL1Q8N6G6 1762 aa12.16□□□□□ -0.46
PUM3-202ENST00000397885 FAM205AQ6ZU69 1335 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 SH3PXD2BA1X283 911 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 TSPY2A6NKD2 308 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 P4HA2O15460 535 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 PDE5AO76074 875 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 PGM1P36871 562 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 GYG1P46976 350 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 TBL3Q12788 808 aaKnown RBP12.15□□□□□ -0.46
PUM3-202ENST00000397885 TCEAL1Q15170 157 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 MFSD4BQ5TF39 518 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 KLHL35Q6PF15 583 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 KLHDC10Q6PID8 442 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 TRIM67Q6ZTA4 783 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 OTOAQ7RTW8 1153 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 RASSF3Q86WH2 238 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 SFR1Q86XK3 245 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 TMPRSS6Q8IU80 811 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 DEPTORQ8TB45 409 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 PLEKHO2Q8TD55 490 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 SNRNP27Q8WVK2 155 aaKnown RBP12.15□□□□□ -0.46
PUM3-202ENST00000397885 KLRG1Q96E93 195 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 SNX27Q96L92 541 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 BTBD9Q96Q07 612 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 RBM38Q9H0Z9 239 aaKnown RBP12.15□□□□□ -0.46
PUM3-202ENST00000397885 SLCO1B3Q9NPD5 702 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 ARL8BQ9NVJ2 186 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 CROTQ9UKG9 612 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
PUM3-202ENST00000397885 COL1A1P02452 1464 aaPredicted RBP12.15□□□□□ -0.46
PUM3-202ENST00000397885 THAP12O43422 761 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 CIB2O75838 187 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 ABHD2P08910 425 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 FUT4P22083 530 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 JAM2P57087 298 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 CXCL9Q07325 125 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 TMEM266Q2M3C6 531 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 TMEM63BQ5T3F8 832 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 SYCP2LQ5T4T6 812 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 C11orf63Q6NUN7 778 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 RBM44Q6ZP01 1051 aaKnown RBP12.15□□□□□ -0.46
PUM3-202ENST00000397885 ADAT2Q7Z6V5 191 aaKnown RBP12.15□□□□□ -0.46
PUM3-202ENST00000397885 LRRC6Q86X45 466 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 TDRPQ86YL5 185 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 CCDC105Q8IYK2 499 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 CCDC110Q8TBZ0 833 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 NRDE2Q9H7Z3 1164 aa12.15□□□□□ -0.46
PUM3-202ENST00000397885 MTO1Q9Y2Z2 717 aaKnown RBP12.15□□□□□ -0.46
PUM3-202ENST00000397885 C6orf229H3BNL8 230 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 CSDE1O75534 798 aaKnown RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 SERPINB7O75635 380 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 ESRRAP11474 423 aaPredicted RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 CETN2P41208 172 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 HDAC4P56524 1084 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 KCTD19Q17RG1 926 aaPredicted RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 MAP7D1Q3KQU3 841 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 SEL1L2Q5TEA6 688 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 LRRC8BQ6P9F7 803 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 PATL1Q86TB9 770 aaKnown RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 TRABD2AQ86V40 505 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 RHOT2Q8IXI1 618 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 SYT2Q8N9I0 419 aaPredicted RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 LARP4BQ92615 738 aaKnown RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 ALG3Q92685 438 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 DNAJC1Q96KC8 554 aaKnown RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 LRRC19Q9H756 370 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 SSU72Q9NP77 194 aaKnown RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 BLOC1S4Q9NUP1 217 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 ZNF711Q9Y462 761 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms