RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NXF1Q9UBU9 619 aaKnown RBP29.49■■■□□ 2.31
CPNE1-203ENST00000397442 USP27XA6NNY8 438 aa29.48■■■□□ 2.31
CPNE1-203ENST00000397442 CYP26A1O43174 497 aa29.48■■■□□ 2.31
CPNE1-203ENST00000397442 OFD1O75665 1012 aa29.48■■■□□ 2.31
CPNE1-203ENST00000397442 LRPAP1P30533 357 aa29.48■■■□□ 2.31
CPNE1-203ENST00000397442 USP8P40818 1118 aa29.48■■■□□ 2.31
CPNE1-203ENST00000397442 KIF11P52732 1056 aa29.48■■■□□ 2.31
CPNE1-203ENST00000397442 DEFB128Q7Z7B8 93 aa29.48■■■□□ 2.31
CPNE1-203ENST00000397442 REXO2Q9Y3B8 237 aaKnown RBP29.48■■■□□ 2.31
CPNE1-203ENST00000397442 R3HCC1Q9Y3T6 440 aaKnown RBP29.48■■■□□ 2.31
CPNE1-203ENST00000397442 ZNF263O14978 683 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 CCDC172P0C7W6 258 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 CCAR2Q8N163 923 aaKnown RBP29.47■■■□□ 2.31
CPNE1-203ENST00000397442 ACRBPQ8NEB7 543 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 SPTLC3Q9NUV7 552 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 TDRD15B5MCY1 1934 aaKnown RBP29.47■■■□□ 2.31
CPNE1-203ENST00000397442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.47■■■□□ 2.31
CPNE1-203ENST00000397442 EIF3CLB5ME19 914 aaKnown RBP29.47■■■□□ 2.31
CPNE1-203ENST00000397442 LCA5LO95447 670 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 TIMP1P01033 207 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 WEE2P0C1S8 567 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 CYLC1P35663 651 aaPredicted RBP29.47■■■□□ 2.31
CPNE1-203ENST00000397442 CLLU1OSQ5K130 101 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 SCARA5Q6ZMJ2 495 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 EIF3CQ99613 913 aaKnown RBP29.47■■■□□ 2.31
CPNE1-203ENST00000397442 SDCBP2Q9H190 292 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 ELAC1Q9H777 363 aaKnown RBP29.47■■■□□ 2.31
CPNE1-203ENST00000397442 ACP6Q9NPH0 428 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 TMEM161AQ9NX61 479 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 PPP2R2CQ9Y2T4 447 aa29.47■■■□□ 2.31
CPNE1-203ENST00000397442 TTC3P53804 2025 aa29.46■■■□□ 2.31
CPNE1-203ENST00000397442 ALPK3Q96L96 1907 aa29.46■■■□□ 2.31
CPNE1-203ENST00000397442 KRT5P13647 590 aa29.46■■■□□ 2.31
CPNE1-203ENST00000397442 MYO1EQ12965 1108 aa29.46■■■□□ 2.31
CPNE1-203ENST00000397442 SLC47A2Q86VL8 602 aa29.46■■■□□ 2.31
CPNE1-203ENST00000397442 CRIPAKQ8N1N5 446 aa29.46■■■□□ 2.31
CPNE1-203ENST00000397442 MICAL3Q7RTP6 2002 aa29.45■■■□□ 2.31
CPNE1-203ENST00000397442 RFC2P35250 354 aa29.45■■■□□ 2.31
CPNE1-203ENST00000397442 EPS8L1Q8TE68 723 aa29.45■■■□□ 2.31
CPNE1-203ENST00000397442 DEF6Q9H4E7 631 aa29.45■■■□□ 2.31
CPNE1-203ENST00000397442 SMYD3Q9H7B4 428 aa29.45■■■□□ 2.31
CPNE1-203ENST00000397442 PRDM5Q9NQX1 630 aaPredicted RBP29.45■■■□□ 2.31
CPNE1-203ENST00000397442 CISHQ9NSE2 258 aa29.45■■■□□ 2.31
CPNE1-203ENST00000397442 CACNG4Q9UBN1 327 aa29.45■■■□□ 2.31
CPNE1-203ENST00000397442 NOCTQ9UK39 431 aaKnown RBP29.45■■■□□ 2.31
CPNE1-203ENST00000397442 PCDHB4Q9Y5E5 795 aa29.45■■■□□ 2.31
CPNE1-203ENST00000397442 AKR1B10O60218 316 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 POMCP01189 267 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 TMEM270Q6UE05 265 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 TRMT1Q9NXH9 659 aaKnown RBP29.44■■■□□ 2.3
CPNE1-203ENST00000397442 ADAMTS1Q9UHI8 967 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 INPP5FQ9Y2H2 1132 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 A0A087X0T9 212 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 SPTLC1O15269 473 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 CCDC175P0C221 793 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 FAM228BP0C875 321 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 FGFR1P11362 822 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 RAP1GAPP47736 663 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 ZNF132P52740 706 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 CDH8P55286 799 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 GFPT1Q06210 699 aaPredicted RBP29.44■■■□□ 2.3
CPNE1-203ENST00000397442 GRIK3Q13003 919 aa29.44■■■□□ 2.3
CPNE1-203ENST00000397442 NOP9Q86U38 636 aaKnown RBP29.44■■■□□ 2.3
CPNE1-203ENST00000397442 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.44■■■□□ 2.3
CPNE1-203ENST00000397442 ZNF500O60304 480 aaPredicted RBP29.43■■■□□ 2.3
CPNE1-203ENST00000397442 CYP11B1P15538 503 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 CD58P19256 250 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 ANXA13P27216 316 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 CYP27A1Q02318 531 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 SLC18A3Q16572 532 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 SMYD5Q6GMV2 418 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 GLB1LQ6UWU2 654 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 REXO1L1PQ8IX06 675 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 SLC20A1Q8WUM9 679 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 CYP3A43Q9HB55 503 aa29.43■■■□□ 2.3
CPNE1-203ENST00000397442 A0A0U1RQJ8 604 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 P4HA1P13674 534 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 IGFBP6P24592 240 aaPredicted RBP29.42■■■□□ 2.3
CPNE1-203ENST00000397442 PNPLA4P41247 253 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 TNNC1P63316 161 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 CNKSR3Q6P9H4 555 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 RBBP8NLQ8NC74 664 aaPredicted RBP29.42■■■□□ 2.3
CPNE1-203ENST00000397442 SLC30A5Q8TAD4 765 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 ATRIPQ8WXE1 791 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 DDX1Q92499 740 aaKnown RBP29.42■■■□□ 2.3
CPNE1-203ENST00000397442 ZNF560Q96MR9 790 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 PCDH10Q9P2E7 1040 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 NENFQ9UMX5 172 aa29.42■■■□□ 2.3
CPNE1-203ENST00000397442 DDX3XO00571 662 aaKnown RBP eCLIP29.41■■■□□ 2.31e-13■■■□□ 15.3
CPNE1-203ENST00000397442 CALCAP01258 141 aa29.41■■■□□ 2.3
CPNE1-203ENST00000397442 CHRNB2P17787 502 aa29.41■■■□□ 2.3
CPNE1-203ENST00000397442 LNX1Q8TBB1 728 aaPredicted RBP29.41■■■□□ 2.3
CPNE1-203ENST00000397442 PPP1R13BQ96KQ4 1090 aa29.41■■■□□ 2.3
CPNE1-203ENST00000397442 AGPAT1Q99943 283 aa29.41■■■□□ 2.3
CPNE1-203ENST00000397442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.41■■■□□ 2.3
CPNE1-203ENST00000397442 GDAP2Q9NXN4 497 aa29.41■■■□□ 2.3
CPNE1-203ENST00000397442 SNX9Q9Y5X1 595 aa29.41■■■□□ 2.3
CPNE1-203ENST00000397442 CSF2RAP15509 400 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 RAG1P15918 1043 aa29.4■■■□□ 2.3
CPNE1-203ENST00000397442 TAF6P49848 677 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms