RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 STAU1O95793 577 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 ASS1P00966 412 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 ITGB1P05556 798 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 TPM3P06753 285 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 SLC9A1P19634 815 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 KCNMA1Q12791 1236 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 SPOPLQ6IQ16 392 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 Q7L0L9 218 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 SLC39A11Q8N1S5 342 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 LMO3Q8TAP4 145 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 TRIM5Q9C035 493 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 SPG21Q9NZD8 308 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 ADAM28Q9UKQ2 775 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 RWDD3Q9Y3V2 267 aa25.37■■□□□ 1.65
TSPAN4-203ENST00000397397 FSD2A1L4K1 749 aa25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 PON1P27169 355 aa25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 CTNNB1P35222 781 aa25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 NOP14P78316 857 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 LRMPQ12912 555 aa25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 SYCP1Q15431 976 aa25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 ZNF667Q5HYK9 610 aa25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 TMEM173Q86WV6 379 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 BCL7CQ8WUZ0 217 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 IGSF21Q96ID5 467 aa25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 PCMTD1Q96MG8 357 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 ERGIC2Q96RQ1 377 aa25.36■■□□□ 1.65
TSPAN4-203ENST00000397397 LAMA2P24043 3122 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 KPNA7A9QM74 516 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 PAX3P23760 479 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 PPM1AP35813 382 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 BMPR1AP36894 532 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 BRCC3P46736 316 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 SMAD3P84022 425 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 PTPN21Q16825 1174 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 WDR72Q3MJ13 1102 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 GPR153Q6NV75 609 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 TRIM65Q6PJ69 517 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 DSTYKQ6XUX3 929 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 NT5C1BQ96P26 610 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 LSM14BQ9BX40 385 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 VRTNQ9H8Y1 702 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 GRPEL1Q9HAV7 217 aa25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 APOBEC3GQ9HC16 384 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 NXF1Q9UBU9 619 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-203ENST00000397397 I3L4J1 428 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 KLK7P49862 253 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 TNNC1P63316 161 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 TAP1Q03518 808 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 TIGD5Q53EQ6 642 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 TATDN2Q93075 761 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 TMEM169Q96HH4 297 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 C17orf80Q9BSJ5 609 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 POLIQ9UNA4 740 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 SIK3Q9Y2K2 1263 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 SNX9Q9Y5X1 595 aa25.34■■□□□ 1.65
TSPAN4-203ENST00000397397 TRAPPC3O43617 180 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 P4HA1P13674 534 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 AARSP49588 968 aaKnown RBP eCLIP25.33■■□□□ 1.658e-6■■■■■ 52.4
TSPAN4-203ENST00000397397 GSE1Q14687 1217 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 FUT10Q6P4F1 479 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 SPRED2Q7Z698 418 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 SENP8Q96LD8 212 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 SAMD11Q96NU1 681 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 TGS1Q96RS0 853 aaKnown RBP25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 GDAP2Q9NXN4 497 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 MTUS1Q9ULD2 1270 aa25.33■■□□□ 1.65
TSPAN4-203ENST00000397397 SF3B1O75533 1304 aaKnown RBP eCLIP25.32■■□□□ 1.643e-9■■■■■ 206.8
TSPAN4-203ENST00000397397 CYB561D2O14569 222 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 DNAJB2P25686 324 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 APBA1Q02410 837 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 PPP2R2DQ66LE6 453 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 KLHL23Q8NBE8 558 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 SUSD3Q96L08 255 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 MMS19Q96T76 1030 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 PLVAPQ9BX97 442 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 NIF3L1Q9GZT8 377 aa25.32■■□□□ 1.64
TSPAN4-203ENST00000397397 A0A1W2PQC6 194 aa25.31■■□□□ 1.64
TSPAN4-203ENST00000397397 FGF18O76093 207 aa25.31■■□□□ 1.64
TSPAN4-203ENST00000397397 SCARA5Q6ZMJ2 495 aa25.31■■□□□ 1.64
TSPAN4-203ENST00000397397 ARHGEF19Q8IW93 802 aa25.31■■□□□ 1.64
TSPAN4-203ENST00000397397 TIFAQ96CG3 184 aa25.31■■□□□ 1.64
TSPAN4-203ENST00000397397 GPR62Q9BZJ7 368 aa25.31■■□□□ 1.64
TSPAN4-203ENST00000397397 SLC28A3Q9HAS3 691 aa25.31■■□□□ 1.64
TSPAN4-203ENST00000397397 SIX2Q9NPC8 291 aa25.31■■□□□ 1.64
TSPAN4-203ENST00000397397 M0QZQ0 153 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 HUS1O60921 280 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 ODC1P11926 461 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 ZNF75DP51815 510 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 ERVK-21P61565 698 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 KRT17Q04695 432 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 ELAVL2Q12926 359 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 PHLDB3Q6NSJ2 640 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 PPM1KQ8N3J5 372 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 DEFB123Q8N688 67 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 NEK11Q8NG66 645 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 PLCB1Q9NQ66 1216 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 FAM207AQ9NSI2 230 aaPredicted RBP25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 APEX2Q9UBZ4 518 aa25.3■■□□□ 1.64
TSPAN4-203ENST00000397397 RB1P06400 928 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 PBX1P40424 430 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms