RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TPRG1Q6ZUI0 275 aa9.6□□□□□ -0.87
CAPN3-208ENST00000397204 ING5Q8WYH8 240 aa9.6□□□□□ -0.87
CAPN3-208ENST00000397204 DNASE1L2Q92874 299 aa9.6□□□□□ -0.87
CAPN3-208ENST00000397204 ACO2Q99798 780 aaKnown RBP9.6□□□□□ -0.87
CAPN3-208ENST00000397204 CCDC94Q9BW85 323 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-208ENST00000397204 PLA2G2FQ9BZM2 168 aa9.6□□□□□ -0.87
CAPN3-208ENST00000397204 FOXP1Q9H334 677 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-208ENST00000397204 ZFP14Q9HCL3 533 aa9.6□□□□□ -0.87
CAPN3-208ENST00000397204 PTPRHQ9HD43 1115 aa9.6□□□□□ -0.87
CAPN3-208ENST00000397204 TRPV5Q9NQA5 729 aa9.6□□□□□ -0.87
CAPN3-208ENST00000397204 RBM19Q9Y4C8 960 aaKnown RBP9.6□□□□□ -0.87
CAPN3-208ENST00000397204 PHLPP2Q6ZVD8 1323 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 CHD8Q9HCK8 2581 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 I3L4J1 428 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 ZBTB24O43167 697 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-208ENST00000397204 JAK2O60674 1132 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 EIF5BO60841 1220 aaKnown RBP9.59□□□□□ -0.87
CAPN3-208ENST00000397204 KCNE1P15382 129 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 TARSP26639 723 aaKnown RBP9.59□□□□□ -0.87
CAPN3-208ENST00000397204 CCT6AP40227 531 aaKnown RBP9.59□□□□□ -0.87
CAPN3-208ENST00000397204 BRCC3P46736 316 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 TRAPPC10P48553 1259 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 NEK4P51957 841 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 MLLT6P55198 1093 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-208ENST00000397204 ROR1Q01973 937 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 PPP2R5DQ14738 602 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 SLC5A9Q2M3M2 681 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 CYP4A22Q5TCH4 519 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 HAUS3Q68CZ6 603 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 ELMOD1Q8N336 334 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 LEMD2Q8NC56 503 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 C3orf58Q8NDZ4 430 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 IRF7Q92985 503 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 ZNF512Q96ME7 567 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-208ENST00000397204 ACAP3Q96P50 834 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 TCHPQ9BT92 498 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 IER2Q9BTL4 223 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 TRMT61BQ9BVS5 477 aaKnown RBP9.59□□□□□ -0.87
CAPN3-208ENST00000397204 FAM117AQ9C073 453 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 EPC1Q9H2F5 836 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 BHMT2Q9H2M3 363 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 BRD9Q9H8M2 597 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 GOLGA2P5Q9HBQ8 144 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 POLD4Q9HCU8 107 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 HEBP1Q9NRV9 189 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 LRWD1Q9UFC0 647 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 KCNG1Q9UIX4 513 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 DNM3Q9UQ16 869 aa9.59□□□□□ -0.87
CAPN3-208ENST00000397204 WDR27A2RRH5 827 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 SHISA7A6NL88 538 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 CCDC169A6NNP5 214 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 PODXLO00592 558 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 LARGE1O95461 756 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 MCF2P10911 925 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 CEBPBP17676 345 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 PSMC3P17980 439 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 NPTX2P47972 431 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 LMNB2Q03252 620 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 SOX4Q06945 474 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-208ENST00000397204 MTAPQ13126 283 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 LAPTM4AQ15012 233 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 FAM78AQ5JUQ0 283 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 PRSS36Q5K4E3 855 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 IQCEQ6IPM2 695 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 Q6ZNB5 142 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 MAP4K3Q8IVH8 894 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 CELF5Q8N6W0 485 aaKnown RBP9.58□□□□□ -0.88
CAPN3-208ENST00000397204 C4orf32Q8N8J7 132 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 APPL2Q8NEU8 664 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 SMARCD2Q92925 531 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 E2F7Q96AV8 911 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 ASB16Q96NS5 453 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 CORO1BQ9BR76 489 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 NTPCRQ9BSD7 190 aaKnown RBP9.58□□□□□ -0.88
CAPN3-208ENST00000397204 KIFC3Q9BVG8 833 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 MRPL4Q9BYD3 311 aaKnown RBP9.58□□□□□ -0.88
CAPN3-208ENST00000397204 GPR88Q9GZN0 384 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 CDT1Q9H211 546 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 C17orf75Q9HAS0 396 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 TRPV4Q9HBA0 871 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 CYP4F11Q9HBI6 524 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 PRMT8Q9NR22 394 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-208ENST00000397204 KIAA1024Q9UPX6 916 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 NUB1Q9Y5A7 615 aa9.58□□□□□ -0.88
CAPN3-208ENST00000397204 FANCMQ8IYD8 2048 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 NRG2O14511 850 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 CD2BP2O95400 341 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 SEC24AO95486 1093 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 TGM1P22735 817 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 FCARP24071 287 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 MARCKSP29966 332 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 ATXN1P54253 815 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 ARPP19P56211 112 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 PEX3P56589 373 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 OSTNP61366 133 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 GUCY1B3Q02153 619 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 ECM1Q16610 540 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 ZNF568Q3ZCX4 644 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 CTXN3Q4LDR2 81 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms