RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 AMHP03971 560 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 MLH1P40692 756 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 CLCN6P51797 869 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 TEX35Q5T0J7 233 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 C10orf76Q5T2E6 689 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 LMBRD2Q68DH5 695 aaPredicted RBP16.01■□□□□ 0.15
CAPN3-207ENST00000397200 JADE1Q6IE81 842 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 IQCEQ6IPM2 695 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 ALKAL1Q6UXT8 129 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
CAPN3-207ENST00000397200 ZNF365Q70YC5 407 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 OTOP2Q7RTS6 562 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 NPAS4Q8IUM7 802 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 GAD1Q99259 594 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 FAM53CQ9NYF3 392 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 JRKLQ9Y4A0 524 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 SAR1BQ9Y6B6 198 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 A0A087X0T9 212 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 ARL5CA6NH57 179 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 ZBBXA8MT70 800 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 PMM2O15305 246 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 P4HA2O15460 535 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 TMEM191BP0C7N4 346 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 FAM228BP0C875 321 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 PRLRP16471 622 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 RFX1P22670 979 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 AP3M2P53677 418 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 EPHB4P54760 987 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 WDR5P61964 334 aaKnown RBP16■□□□□ 0.15
CAPN3-207ENST00000397200 CLDN10P78369 228 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 TFAMQ00059 246 aaKnown RBP16■□□□□ 0.15
CAPN3-207ENST00000397200 TMEM132DQ14C87 1099 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 XKR4Q5GH76 650 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 C1orf220Q5T0J3 134 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 GLB1LQ6UWU2 654 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 NT5DC4Q86YG4 428 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 EFCAB13Q8IY85 973 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 KIF12Q96FN5 646 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 ZFP42Q96MM3 310 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 SPAG5Q96R06 1193 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 TSPAN18Q96SJ8 248 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 ARGLU1Q9NWB6 273 aaPredicted RBP16■□□□□ 0.15
CAPN3-207ENST00000397200 ZNF446Q9NWS9 450 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 DERAQ9Y315 318 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 C2CD2Q9Y426 696 aa16■□□□□ 0.15
CAPN3-207ENST00000397200 TDRD15B5MCY1 1934 aaKnown RBP16■□□□□ 0.15
CAPN3-207ENST00000397200 PTPRJQ12913 1337 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 SMIM28A0A1B0GU29 152 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 MACROD2A1Z1Q3 448 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 HOXA2O43364 376 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 N4BP1O75113 896 aaKnown RBP15.99■□□□□ 0.15
CAPN3-207ENST00000397200 GFPT2O94808 682 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 ZRANB2O95218 330 aaKnown RBP eCLIP15.99■□□□□ 0.15
CAPN3-207ENST00000397200 NFICP08651 508 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 KCNE1P15382 129 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 GTF2H1P32780 548 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 GCLMP48507 274 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 MYL7Q01449 175 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 PPP3CAQ08209 521 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 DUOXA2Q1HG44 320 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 GLRA4Q5JXX5 417 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 TMEM240Q5SV17 173 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 ZNF572Q7Z3I7 529 aaPredicted RBP15.99■□□□□ 0.15
CAPN3-207ENST00000397200 OLIG1Q8TAK6 271 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 HELQQ8TDG4 1101 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 ANKRD36BP1Q96IX9 119 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 RPGRIP1Q96KN7 1286 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.99■□□□□ 0.15
CAPN3-207ENST00000397200 CXCL16Q9H2A7 254 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 SALL4Q9UJQ4 1053 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 INPP5FQ9Y2H2 1132 aa15.99■□□□□ 0.15
CAPN3-207ENST00000397200 CTAGE15A4D2H0 777 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 ENC1O14682 589 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 XPOTO43592 962 aaKnown RBP15.98■□□□□ 0.15
CAPN3-207ENST00000397200 UPP2O95045 317 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 TNNC2P02585 160 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 CTAGE8P0CG41 777 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 FGFR1P11362 822 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 FERP16591 822 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 MXI1P50539 228 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 PTK2Q05397 1052 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 CKAP4Q07065 602 aaKnown RBP15.98■□□□□ 0.15
CAPN3-207ENST00000397200 KRT39Q6A163 491 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 ZNF571Q7Z3V5 609 aaPredicted RBP15.98■□□□□ 0.15
CAPN3-207ENST00000397200 CTAGE6Q86UF2 777 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 FMNL3Q8IVF7 1028 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 CTAGE4Q8IX94 777 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 ABI1Q8IZP0 508 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 OR5B17Q8NGF7 314 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 LMO3Q8TAP4 145 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 URGCPQ8TCY9 931 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 ZNF516Q92618 1163 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 ZMAT2Q96NC0 199 aaKnown RBP15.98■□□□□ 0.15
CAPN3-207ENST00000397200 ALS2CR12Q96Q35 445 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 MTMR12Q9C0I1 747 aa15.98■□□□□ 0.15
CAPN3-207ENST00000397200 INTS2Q9H0H0 1204 aaKnown RBP15.98■□□□□ 0.15
CAPN3-207ENST00000397200 ANKZF1Q9H8Y5 726 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms