RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TRPC4Q9UBN4 977 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 VTI1BQ9UEU0 232 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 ITIH6Q6UXX5 1313 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 KRT16P08779 473 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 CAMK1Q14012 370 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 CCDC137Q6PK04 289 aaKnown RBP12.89□□□□□ -0.35
SMU1-201ENST00000397149 ZBTB38Q8NAP3 1195 aaPredicted RBP12.89□□□□□ -0.35
SMU1-201ENST00000397149 SGF29Q96ES7 293 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 DDX56Q9NY93 547 aaKnown RBP12.89□□□□□ -0.35
SMU1-201ENST00000397149 ANAPC2Q9UJX6 822 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 WEE1P30291 646 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 TALDO1P37837 337 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 MTFR1Q15390 333 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 NDUFA5Q16718 116 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 RD3Q7Z3Z2 195 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 TINF2Q9BSI4 451 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 C19orf44Q9H6X5 657 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 MTMR6Q9Y217 621 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 ATAD3BQ5T9A4 648 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 SNRNP48Q6IEG0 339 aaKnown RBP12.89□□□□□ -0.35
SMU1-201ENST00000397149 TRIM63Q969Q1 353 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 RBM7Q9Y580 266 aaKnown RBP12.89□□□□□ -0.35
SMU1-201ENST00000397149 PHLPP2Q6ZVD8 1323 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 MAGEA9P43362 315 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 NR1H3Q13133 447 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 LRRC49Q8IUZ0 686 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 ELL3Q9HB65 397 aaPredicted RBP12.89□□□□□ -0.35
SMU1-201ENST00000397149 SEMA3EO15041 775 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 GCFC2P16383 781 aaKnown RBP12.89□□□□□ -0.35
SMU1-201ENST00000397149 ALDH9A1P49189 494 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
SMU1-201ENST00000397149 KLC1Q07866 573 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 TRADDQ15628 312 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 CCDC3Q9BQI4 270 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 CCDC134Q9H6E4 229 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 C10orf88Q9H8K7 445 aa12.89□□□□□ -0.35
SMU1-201ENST00000397149 SMIM31A0A1B0GVY4 71 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 GOLGA8TH3BQL2 631 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 CYP27B1O15528 508 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 RGS4P49798 205 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 UTS2BQ765I0 119 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 CRLS1Q9UJA2 301 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 TRIM49BA6NDI0 452 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 AP3D1O14617 1153 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 CASP1P29466 404 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 FAM118BQ9BPY3 351 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 POLR3FQ9H1D9 316 aaPredicted RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 ZNF624Q9P2J8 865 aaPredicted RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 HDAC6Q9UBN7 1215 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 GABBR1Q9UBS5 961 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 C16orf89Q6UX73 402 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 PAGE5Q96GU1 130 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 FOXP1Q9H334 677 aaPredicted RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 ERAP1Q9NZ08 941 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 TMCC3Q9ULS5 477 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 ARIH1Q9Y4X5 557 aaPredicted RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 SNAPC4Q5SXM2 1469 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 CLTBP09497 229 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 AKR1B1P15121 316 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 SGSM1Q2NKQ1 1148 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 SYTL1Q8IYJ3 562 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 C4orf33Q8N1A6 199 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 GPT2Q8TD30 523 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 IARS2Q9NSE4 1012 aaKnown RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 TBX3O15119 743 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 ERN1O75460 977 aaKnown RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 GH2P01242 217 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 PROSER1Q86XN7 944 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 SEC16BQ96JE7 1060 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 ZNF682O95780 498 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 ABCB1P08183 1280 aaPredicted RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 VAMP7P51809 220 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 CAMK2GQ13555 558 aaPredicted RBP12.88□□□□□ -0.35
SMU1-201ENST00000397149 CACTIN-AS1Q8N1I8 211 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 WRNIP1Q96S55 665 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 XDHP47989 1333 aa12.88□□□□□ -0.35
SMU1-201ENST00000397149 SNTNA6NMZ2 147 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 FGFR1P11362 822 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 CCNE1P24864 410 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 MCCD1P59942 119 aaPredicted RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 PADI6Q6TGC4 694 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 DSG4Q86SJ6 1040 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 CLYBLQ8N0X4 340 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 RDM1Q8NG50 284 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 UVRAGQ9P2Y5 699 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 PI4KBQ9UBF8 816 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 PCDHA6Q9UN73 950 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 PCDHA8Q9Y5H6 950 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 UMPSP11172 480 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms